RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ATXN7L2Q5T6C5 722 aaPredicted RBP0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 HIST2H2BCQ6DN03 193 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 C1QL2Q7Z5L3 287 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 ZBTB9Q96C00 473 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 HSH2DQ96JZ2 352 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 LACRTQ9GZZ8 138 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 OSGEPQ9NPF4 335 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 TMEM59LQ9UK28 342 aa0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 COL3A1P02461 1466 aaPredicted RBP0.27□□□□□ -2.37
RNU4-88P-201ENST00000411220 TP53BP1Q12888 1972 aaPredicted RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 U2SURPO15042 1029 aaKnown RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 CHGAP10645 457 aaKnown RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 MAKP20794 623 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 KRT2P35908 639 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 GJA5P36382 358 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 PIP4K2BP78356 416 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 DGCR2P98153 550 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 MDM2Q00987 491 aaPredicted RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 RHPN1Q8TCX5 695 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 WWC2-AS2Q96NR7 200 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 C19orf44Q9H6X5 657 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 MMRN2Q9H8L6 949 aa0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 IQSEC3Q9UPP2 1182 aaPredicted RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 RTCBQ9Y3I0 505 aaKnown RBP0.26□□□□□ -2.37
RNU4-88P-201ENST00000411220 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 DNAJC25-GNG10A0A024R161 153 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 CDK2AP1O14519 115 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 PLSCR1O15162 318 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 RTL8CO15255 209 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 STAU1O95793 577 aaKnown RBP0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 ADH5P11766 374 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 EPHA1P21709 976 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 VIPR1P32241 457 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 FHL1Q13642 323 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 EXOSC6Q5RKV6 272 aaKnown RBP0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 NPNTQ6UXI9 565 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 LRRN4Q8WUT4 740 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 C1QTNF7Q9BXJ2 289 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 PRDM14Q9GZV8 571 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 ZMYND15Q9H091 742 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 DNAJC25Q9H1X3 360 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 ATP13A1Q9HD20 1204 aa0.25□□□□□ -2.37
RNU4-88P-201ENST00000411220 SH3D21A4FU49 640 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 DNAJC9-AS1A6NH13 148 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 ZAR1LA6NP61 321 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 RARAP10276 462 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 ZNF81P51508 661 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 FSTL1Q12841 308 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 NKPD1Q17RQ9 610 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 RALGPS1Q5JS13 557 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 SCARA3Q6AZY7 606 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 LRFN4Q6PJG9 635 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 KRT25Q7Z3Z0 450 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 ULK2Q8IYT8 1036 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 LGI4Q8N135 537 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 SIMC1Q8NDZ2 872 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 HELBQ8NG08 1087 aaPredicted RBP0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 SP110Q9HB58 689 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 FAM105AQ9NUU6 356 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 SUSD2Q9UGT4 822 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 INVSQ9Y283 1065 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 PCDHB15Q9Y5E8 787 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
RNU4-88P-201ENST00000411220 ERI2A8K979 691 aaKnown RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 LEFTY1O75610 366 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 TARSP26639 723 aaKnown RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 HOXC13P31276 330 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 PRKD1Q15139 912 aaPredicted RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 USP39Q53GS9 565 aaKnown RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 OLFML2BQ68BL8 750 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 CIR1Q86X95 450 aaPredicted RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 CARFQ8N187 725 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 REXO1Q8N1G1 1221 aaKnown RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 KRT78Q8N1N4 520 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 ADAMTS15Q8TE58 950 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 FAM217BQ9NTX9 383 aaPredicted RBP0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 MTMR4Q9NYA4 1195 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 LRFN2Q9ULH4 789 aa0.23□□□□□ -2.37
RNU4-88P-201ENST00000411220 TMEM191CA6NGB0 347 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 FAM177BA6PVY3 158 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 H3BRJ5 948 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 GPR42O15529 346 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 BUB1BO60566 1050 aaPredicted RBP0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 CBFA2T3O75081 653 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 NOVP48745 357 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 KRTAP12-2P59991 146 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 E2F1Q01094 437 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 VPS72Q15906 364 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 LCE3EQ5T5B0 92 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 STRIP1Q5VSL9 837 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 KRTAP5-10Q6L8G5 202 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 Q6ZPA2 131 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 DYMQ7RTS9 669 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 BTLAQ7Z6A9 289 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 ZNF280CQ8ND82 737 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 GPR150Q8NGU9 434 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 ANKS1AQ92625 1134 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 L3MBTL2Q969R5 705 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 WACQ9BTA9 647 aa0.22□□□□□ -2.37
RNU4-88P-201ENST00000411220 USP26Q9BXU7 913 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms