RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 FMR1Q06787 632 aaKnown RBP eCLIP24.55■■□□□ 1.52
C4orf48-202ENST00000409860 PPARAQ07869 468 aa24.55■■□□□ 1.52
C4orf48-202ENST00000409860 SSC5DA1L4H1 1573 aa24.54■■□□□ 1.52
C4orf48-202ENST00000409860 TBC1D12O60347 775 aa24.54■■□□□ 1.52
C4orf48-202ENST00000409860 IMMTQ16891 758 aaKnown RBP24.54■■□□□ 1.52
C4orf48-202ENST00000409860 MIGA2Q7L4E1 593 aa24.54■■□□□ 1.52
C4orf48-202ENST00000409860 ZNF341Q9BYN7 854 aa24.54■■□□□ 1.52
C4orf48-202ENST00000409860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.54■■□□□ 1.52
C4orf48-202ENST00000409860 RBM8AQ9Y5S9 174 aaKnown RBP24.54■■□□□ 1.52
C4orf48-202ENST00000409860 ZNF213O14771 459 aa24.53■■□□□ 1.52
C4orf48-202ENST00000409860 TTLL12Q14166 644 aaPredicted RBP24.53■■□□□ 1.52
C4orf48-202ENST00000409860 METTL16Q86W50 562 aaKnown RBP24.53■■□□□ 1.52
C4orf48-202ENST00000409860 SWAP70Q9UH65 585 aa24.53■■□□□ 1.52
C4orf48-202ENST00000409860 MYH1P12882 1939 aa24.53■■□□□ 1.52
C4orf48-202ENST00000409860 ROBO3Q96MS0 1386 aa24.53■■□□□ 1.52
C4orf48-202ENST00000409860 EPB41L2O43491 1005 aaKnown RBP24.52■■□□□ 1.52
C4orf48-202ENST00000409860 FKBP1BP68106 108 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 MAP3K10Q02779 954 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 EVX2Q03828 476 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 PRKG1Q13976 671 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 ARMC9Q7Z3E5 817 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 GBA2Q9HCG7 927 aaPredicted RBP24.52■■□□□ 1.52
C4orf48-202ENST00000409860 ANAPC4Q9UJX5 808 aa24.52■■□□□ 1.52
C4orf48-202ENST00000409860 BAZ2AQ9UIF9 1905 aaKnown RBP24.51■■□□□ 1.51
C4orf48-202ENST00000409860 FAM196BA6NMK8 535 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 IREB2P48200 963 aaKnown RBP24.51■■□□□ 1.51
C4orf48-202ENST00000409860 HAND2P61296 217 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 GABPAQ06546 454 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 C16orf86Q6ZW13 317 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 C2orf69Q8N8R5 385 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 DYNLL2Q96FJ2 89 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 ZNF287Q9HBT7 754 aa24.51■■□□□ 1.51
C4orf48-202ENST00000409860 PDE4BQ07343 736 aa24.5■■□□□ 1.51
C4orf48-202ENST00000409860 DNAJC18Q9H819 358 aa24.5■■□□□ 1.51
C4orf48-202ENST00000409860 ANGEL1Q9UNK9 670 aaKnown RBP24.5■■□□□ 1.51
C4orf48-202ENST00000409860 SMIM22K7EJ46 135 aa24.49■■□□□ 1.51
C4orf48-202ENST00000409860 SLURP2P0DP57 97 aa24.49■■□□□ 1.51
C4orf48-202ENST00000409860 CTDSPL2Q05D32 466 aa24.49■■□□□ 1.51
C4orf48-202ENST00000409860 RNF20Q5VTR2 975 aa24.49■■□□□ 1.51
C4orf48-202ENST00000409860 STK11IPQ8N1F8 1099 aa24.49■■□□□ 1.51
C4orf48-202ENST00000409860 RNF41Q9H4P4 317 aaPredicted RBP24.49■■□□□ 1.51
C4orf48-202ENST00000409860 USP2O75604 605 aaPredicted RBP24.48■■□□□ 1.51
C4orf48-202ENST00000409860 CDK8P49336 464 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 MAP3K11Q16584 847 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 CST9Q5W186 159 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 SLC44A5Q8NCS7 719 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 KLRG1Q96E93 195 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 WRNIP1Q96S55 665 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 MKNK2Q9HBH9 465 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 FZD1Q9UP38 647 aa24.48■■□□□ 1.51
C4orf48-202ENST00000409860 LAMB1P07942 1786 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 PCP11498 1178 aaKnown RBP24.47■■□□□ 1.51
C4orf48-202ENST00000409860 SHMT1P34896 483 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 CREB3L3Q68CJ9 461 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 TATDN1Q6P1N9 297 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 ZNF112Q9UJU3 913 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 PAPPA2Q9BXP8 1791 aa24.47■■□□□ 1.51
C4orf48-202ENST00000409860 TMEM88BA6NKF7 163 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 CYP21A2P08686 494 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 MCCP23508 829 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 NECTIN1Q15223 517 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 AKNAD1Q5T1N1 836 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 MFSD6Q6ZSS7 791 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 TBC1D10CQ8IV04 446 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.46■■□□□ 1.513e-8■■■■□ 23
C4orf48-202ENST00000409860 STAG1Q8WVM7 1258 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 USP26Q9BXU7 913 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 SIPA1L1O43166 1804 aa24.46■■□□□ 1.51
C4orf48-202ENST00000409860 PHF20L1A8MW92 1017 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 SLC27A2O14975 620 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 MAP3K9P80192 1104 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 CERKLQ49MI3 558 aaPredicted RBP24.45■■□□□ 1.5
C4orf48-202ENST00000409860 MOB2Q70IA6 237 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 NBPF3Q9H094 633 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 TOMM22Q9NS69 142 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 CSADQ9Y600 493 aa24.45■■□□□ 1.5
C4orf48-202ENST00000409860 UNCXA6NJT0 531 aa24.44■■□□□ 1.5
C4orf48-202ENST00000409860 CTNND1O60716 968 aaKnown RBP24.44■■□□□ 1.5
C4orf48-202ENST00000409860 PRDM1O75626 825 aa24.44■■□□□ 1.5
C4orf48-202ENST00000409860 SEC24BO95487 1268 aa24.44■■□□□ 1.5
C4orf48-202ENST00000409860 ZKSCAN1P17029 563 aaPredicted RBP24.44■■□□□ 1.5
C4orf48-202ENST00000409860 ANKRD13AQ8IZ07 590 aa24.44■■□□□ 1.5
C4orf48-202ENST00000409860 CCDC17Q96LX7 622 aa24.44■■□□□ 1.5
C4orf48-202ENST00000409860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.44■■□□□ 1.5
C4orf48-202ENST00000409860 UBE2Q2LH0YL09 131 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 ORC4O43929 436 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 FGRP09769 529 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 INPP5BP32019 993 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 HSPA4P34932 840 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 APLP1P51693 650 aa24.43■■□□□ 1.5
C4orf48-202ENST00000409860 ZNF444Q8N0Y2 327 aaPredicted RBP24.43■■□□□ 1.5
C4orf48-202ENST00000409860 GDF11O95390 407 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 RASA1P20936 1047 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 CAP2P40123 477 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 NT5C2P49902 561 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 NOL9Q5SY16 702 aaKnown RBP24.42■■□□□ 1.5
C4orf48-202ENST00000409860 LDLRAD1Q5T700 205 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 SCYL3Q8IZE3 742 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 CNNM2Q9H8M5 875 aa24.42■■□□□ 1.5
C4orf48-202ENST00000409860 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms