RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RESP18Q5W5W9 173 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 TRAPPC11Q7Z392 1133 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 WWC3Q9ULE0 1092 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 CCDC61Q9Y6R9 512 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 RASSF9O75901 435 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 RBL2Q08999 1139 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SNCBQ16143 134 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 FILIP1LQ4L180 1135 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 NCAPH2Q6IBW4 605 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 UBE3BQ7Z3V4 1068 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 METTL16Q86W50 562 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 RUFY1Q96T51 708 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 CCDC8Q9H0W5 538 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ACTR5Q9H9F9 607 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 BSDC1Q9NW68 430 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PCDHA5Q9Y5H7 936 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 OVOS2A0A0G2JMS6 1433 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 OVOS2A0A0J9YW53 1432 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PSMD14O00487 310 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 FDPSP14324 419 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SLC8A1P32418 973 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SSR1P43307 286 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 HSP90AB2PQ58FF8 381 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 OVOS2Q6IE36 1432 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 CCNI2Q6ZMN8 369 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ANKARQ7Z5J8 1434 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 NCOA5Q9HCD5 579 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ITIH6Q6UXX5 1313 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 MYO5BQ9ULV0 1848 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PI4KAP2A4QPH2 592 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PAX7P23759 505 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 CLNS1AP54105 237 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ICA1Q05084 483 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 IFFO1Q0D2I5 559 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 ALS2CLQ60I27 953 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 CYP26C1Q6V0L0 522 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PI4KAP1Q8N8J0 262 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 TEX13AQ9BXU3 409 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 PA2G4Q9UQ80 394 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SAR1BQ9Y6B6 198 aa6.59□□□□□ -1.35
R3HDM1-202ENST00000409478 SRRM3A6NNA2 597 aaPredicted RBP6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 SASH1O94885 1247 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 SLC8A3P57103 927 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 KIF23Q02241 960 aaPredicted RBP6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 PDE4BQ07343 736 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 BIRC2Q13490 618 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 SAMD1Q6SPF0 538 aaPredicted RBP6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 STOX1Q6ZVD7 989 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 TICAM2Q86XR7 235 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 ATP6V0A4Q9HBG4 840 aa6.59□□□□□ -1.36
R3HDM1-202ENST00000409478 COL15A1P39059 1388 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 PEAK1Q9H792 1746 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 MARCKSP29966 332 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 NAP1L1P55209 391 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 TRIM14Q14142 442 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 NAIF1Q69YI7 327 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 SHC4Q6S5L8 630 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 AENQ8WTP8 325 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 DSCC1Q9BVC3 393 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 EPN3Q9H201 632 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 MAN1B1Q9UKM7 699 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 KCNH3Q9ULD8 1083 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 MRC1P22897 1456 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 SH3TC1Q8TE82 1336 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 SEMA3EO15041 775 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 ATP5JP18859 108 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 PBX1P40424 430 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 PLCD1P51178 756 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 TAX1BP1Q86VP1 789 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 SPATS2LQ9NUQ6 558 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 USP31Q70CQ4 1352 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 RTN2O75298 545 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 CDC27P30260 824 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 APBA1Q02410 837 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 FMR1Q06787 632 aaKnown RBP eCLIP6.58□□□□□ -1.361e-6■■■■■ 39.4
R3HDM1-202ENST00000409478 POSTNQ15063 836 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 HSP90AA4PQ58FG1 418 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 PAPD7Q5XG87 772 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 RCSD1Q6JBY9 416 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 PARP9Q8IXQ6 854 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 CCDC13Q8IYE1 715 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 ACRBPQ8NEB7 543 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 ARMC2Q8NEN0 867 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 SH3GL3Q99963 347 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 HAUS4Q9H6D7 363 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 BATF3Q9NR55 127 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 NALCNQ8IZF0 1738 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 ZNF609O15014 1411 aa6.58□□□□□ -1.36
R3HDM1-202ENST00000409478 DIP2BQ9P265 1576 aa6.57□□□□□ -1.36
R3HDM1-202ENST00000409478 A0A0U1RQJ8 604 aa6.57□□□□□ -1.36
R3HDM1-202ENST00000409478 HSF2BPO75031 334 aa6.57□□□□□ -1.36
R3HDM1-202ENST00000409478 BMP6P22004 513 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms