RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 PPIL2Q13356 520 aa17.32■□□□□ 0.36
COPS7B-205ENST00000409295 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
COPS7B-205ENST00000409295 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
COPS7B-205ENST00000409295 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
COPS7B-205ENST00000409295 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-205ENST00000409295 CETPP11597 493 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 GJA5P36382 358 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 IFNL1Q8IU54 200 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 ATP8A2Q9NTI2 1148 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
COPS7B-205ENST00000409295 CCL15-CCL14A0A0B4J2E2 113 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 CCL15Q16663 113 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 APPBP2Q92624 585 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 MCM9Q9NXL9 1143 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 ZHX2Q9Y6X8 837 aa17.3■□□□□ 0.36
COPS7B-205ENST00000409295 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 TESPA1A2RU30 521 aaPredicted RBP17.29■□□□□ 0.36
COPS7B-205ENST00000409295 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 CXCL11O14625 94 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 IRF6O14896 467 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 SLFNL1Q499Z3 407 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 MS4A4AQ96JQ5 239 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 SERPINB13Q9UIV8 391 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 SLC4A4Q9Y6R1 1079 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 MAST2Q6P0Q8 1798 aa17.29■□□□□ 0.36
COPS7B-205ENST00000409295 TRIM6-TRIM34B2RNG4 842 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 PTPRAP18433 802 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 CAP2P40123 477 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 SLC4A8Q2Y0W8 1093 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 METTL16Q86W50 562 aaKnown RBP17.28■□□□□ 0.36
COPS7B-205ENST00000409295 SDR42E1Q8WUS8 393 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
COPS7B-205ENST00000409295 DCP1AQ9NPI6 582 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-205ENST00000409295 GINM1Q9NU53 330 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
COPS7B-205ENST00000409295 NEFLP07196 543 aa17.27■□□□□ 0.36
COPS7B-205ENST00000409295 GNAT2P19087 354 aa17.27■□□□□ 0.36
COPS7B-205ENST00000409295 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
COPS7B-205ENST00000409295 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
COPS7B-205ENST00000409295 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
COPS7B-205ENST00000409295 EHD4Q9H223 541 aa17.27■□□□□ 0.36
COPS7B-205ENST00000409295 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.35
COPS7B-205ENST00000409295 PRKAB2O43741 272 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 CHGBP05060 677 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 APPP05067 770 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-205ENST00000409295 ASNSP08243 561 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 COL13A1Q5TAT6 717 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-205ENST00000409295 FASTKD5Q7L8L6 764 aaKnown RBP17.26■□□□□ 0.35
COPS7B-205ENST00000409295 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 OSBP2Q969R2 916 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
COPS7B-205ENST00000409295 USP17L5A8MUK1 530 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
COPS7B-205ENST00000409295 PLCD1P51178 756 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 PTPN18Q99952 460 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 ZFYVE28Q9HCC9 887 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
COPS7B-205ENST00000409295 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
COPS7B-205ENST00000409295 PCNTO95613 3336 aa17.24■□□□□ 0.35
COPS7B-205ENST00000409295 PATL2C9JE40 543 aaKnown RBP17.24■□□□□ 0.35
COPS7B-205ENST00000409295 GPAA1O43292 621 aa17.24■□□□□ 0.35
COPS7B-205ENST00000409295 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
COPS7B-205ENST00000409295 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
COPS7B-205ENST00000409295 CFHR5Q9BXR6 569 aa17.24■□□□□ 0.35
COPS7B-205ENST00000409295 NACAP1Q9BZK3 213 aa17.24■□□□□ 0.35
COPS7B-205ENST00000409295 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 USP17L12C9JPN9 530 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 USP17L21D6R901 530 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-205ENST00000409295 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
COPS7B-205ENST00000409295 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 ZNF280CQ8ND82 737 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
COPS7B-205ENST00000409295 GPR25O00155 361 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 GDF11O95390 407 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 SPP2Q13103 211 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
COPS7B-205ENST00000409295 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
COPS7B-205ENST00000409295 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms