RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
AFF3-202ENST00000409236 CCDC105Q8IYK2 499 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
AFF3-202ENST00000409236 TUBB6Q9BUF5 446 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 NBPF3Q9H094 633 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 RAPGEF1Q13905 1077 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 TRIM15Q9C019 465 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 ARHGAP6O43182 974 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 HSP90AA4PQ58FG1 418 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
AFF3-202ENST00000409236 NAP1L4Q99733 375 aaKnown RBP15.33■□□□□ 0.04
AFF3-202ENST00000409236 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
AFF3-202ENST00000409236 GSTA1P08263 222 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 GSTA2P09210 222 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 GNA11P29992 359 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 ASIC2Q16515 512 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 TTC22Q5TAA0 569 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 ZNF449Q6P9G9 518 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 TMTC1Q8IUR5 882 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
AFF3-202ENST00000409236 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.32■□□□□ 0.04
AFF3-202ENST00000409236 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 SNX21Q969T3 373 aa15.32■□□□□ 0.04
AFF3-202ENST00000409236 IPO11Q9UI26 975 aaKnown RBP15.32■□□□□ 0.04
AFF3-202ENST00000409236 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
AFF3-202ENST00000409236 RBM26Q5T8P6 1007 aaKnown RBP15.32■□□□□ 0.04
AFF3-202ENST00000409236 LDHCP07864 332 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 EEF1B2P24534 225 aaKnown RBP15.31■□□□□ 0.04
AFF3-202ENST00000409236 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 FRMD3A2A2Y4 597 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 KRT79Q5XKE5 535 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
AFF3-202ENST00000409236 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 AMOTL2Q9Y2J4 779 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 CTNND2Q9UQB3 1225 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 HGSO14964 777 aaPredicted RBP15.31■□□□□ 0.04
AFF3-202ENST00000409236 OCA2Q04671 838 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 EFCAB14O75071 495 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 CDAN1Q8IWY9 1227 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
AFF3-202ENST00000409236 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
AFF3-202ENST00000409236 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 IGSF3O75054 1194 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 BCRP11274 1271 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 MGARPQ8TDB4 240 aa15.31■□□□□ 0.04
AFF3-202ENST00000409236 PPP1R12AO14974 1030 aaPredicted RBP15.3■□□□□ 0.04
AFF3-202ENST00000409236 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 NAPAP54920 295 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 KRT80Q6KB66 452 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
AFF3-202ENST00000409236 SPZ1Q9BXG8 430 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 PACSIN2Q9UNF0 486 aaPredicted RBP15.3■□□□□ 0.04
AFF3-202ENST00000409236 MCF2P10911 925 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 DMTNQ08495 405 aa15.3■□□□□ 0.04
AFF3-202ENST00000409236 SERPINB10P48595 397 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 CCDC197Q8NCU1 140 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 UBE3BQ7Z3V4 1068 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 RSAD2Q8WXG1 361 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 WDR70Q9NW82 654 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 DTHD1Q6ZMT9 781 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 KRT4P19013 534 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 PLCD1P51178 756 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 RNF34Q969K3 372 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 SERPINI1Q99574 410 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 TEX12Q9BXU0 123 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 GOLGA4Q13439 2230 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 EIF3CLB5ME19 914 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 GNGT1P63211 74 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 MRPL28Q13084 256 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 EIF3CQ99613 913 aaKnown RBP15.29■□□□□ 0.04
AFF3-202ENST00000409236 VPS37BQ9H9H4 285 aa15.29■□□□□ 0.04
AFF3-202ENST00000409236 GNGT2O14610 69 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 TSC1Q92574 1164 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 EXOC7Q9UPT5 735 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 TNFAIP3P21580 790 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
AFF3-202ENST00000409236 FLOT2Q14254 428 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 GJC2Q5T442 439 aaPredicted RBP15.28■□□□□ 0.04
AFF3-202ENST00000409236 MCF2L2Q86YR7 1114 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 DHX58Q96C10 678 aa15.28■□□□□ 0.04
AFF3-202ENST00000409236 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms