RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 COL5A2P05997 1499 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MBD5Q9P267 1494 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TECTAO75443 2155 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ITSN1Q15811 1721 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TEX51A0A1B0GUA7 166 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 GRXCR2A6NFK2 248 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PROM1O43490 865 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PIGRP01833 764 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ERBB2P04626 1255 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 LMNB1P20700 586 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 KCNA5P22460 613 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TGM1P22735 817 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 GGT5P36269 586 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 NOVA1P51513 510 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PPP2R2AP63151 447 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 YBX1P67809 324 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 HTRA4P83105 476 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SRSF3P84103 164 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TLE1Q04724 770 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SPEM2Q0P670 501 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 HNRNPA0Q13151 305 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TCTN1Q2MV58 587 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MAP7D1Q3KQU3 841 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 LEXMQ3ZCV2 418 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TBC1D10BQ4KMP7 808 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ZNF484Q5JVG2 852 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RGMBQ6NW40 437 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ZC3H14Q6PJT7 736 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 CCDC129Q6ZRS4 1044 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TBC1D9Q6ZT07 1266 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SMIM5Q71RC9 77 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MAMDC2Q7Z304 686 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 GPR155Q7Z3F1 870 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 KRT25Q7Z3Z0 450 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RNF180Q86T96 592 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SLCO6A1Q86UG4 719 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 CADPS2Q86UW7 1296 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PNMA8AQ86V59 439 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ADHFE1Q8IWW8 467 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ELOA2Q8IYF1 753 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 THEMISQ8N1K5 641 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 CIARTQ8N365 385 aaPredicted RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 LMNTD1Q8N9Z9 388 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SUMF1Q8NBK3 374 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 REPS2Q8NFH8 660 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SPATA20Q8TB22 786 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 DDX54Q8TDD1 881 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 U2AF1L4Q8WU68 220 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SREK1Q8WXA9 508 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RTF1Q92541 710 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 NDRG1Q92597 394 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MARVELD3Q96A59 401 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 HVCN1Q96D96 273 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MBD6Q96DN6 1003 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ZNF503Q96F45 646 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ERO1AQ96HE7 468 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 LURAP1Q96LR2 239 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RNPC3Q96LT9 517 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 COL21A1Q96P44 957 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SMOQ99835 787 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SMR3AQ99954 134 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 UNKQ9C0B0 810 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RNF208Q9H0X6 261 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RASSF4Q9H2L5 321 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 NKX2-4Q9H2Z4 354 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 R3HDMLQ9H3Y0 253 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PRORYQ9H606 182 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 C14orf93Q9H972 538 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ZFYVE28Q9HCC9 887 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PARD6AQ9NPB6 346 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 LUC7LQ9NQ29 371 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 JADE2Q9NQC1 790 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 TLR8Q9NR97 1041 aaKnown RBP0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 BTG4Q9NY30 223 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 CHPF2Q9P2E5 772 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SUSD2Q9UGT4 822 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PCDHGB5Q9Y5G0 923 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SLC4A7Q9Y6M7 1214 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 EFCAB5A4FU69 1503 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 DIP2CQ9Y2E4 1556 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 FAT1Q14517 4588 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 MROH1Q8NDA8 1641 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ZMYM2Q9UBW7 1377 aa0.31□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 NHSQ6T4R5 1651 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 C9orf84Q5VXU9 1444 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 PRRC2BQ5JSZ5 2229 aaKnown RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 SHROOM3Q8TF72 1996 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 UHRF1BP1LA0JNW5 1464 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RGPD3A6NKT7 1758 aaPredicted RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 RGPD4Q7Z3J3 1758 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ATP7AQ04656 1500 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 ITGB4P16144 1822 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 A0A087WV48 116 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 A0A087X0B3 334 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 FBLL1A6NHQ2 334 aaKnown RBP0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 C19orf67A6NJJ6 358 aa0.3□□□□□ -2.36
RNU6ATAC11P-201ENST00000408541 J3QW42 95 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms