RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
MSH2-202ENST00000406134 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 A0A087X0B3 334 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 SYKP43405 635 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 FANCCQ00597 558 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 AK7Q96M32 723 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 ZKSCAN3Q9BRR0 538 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 EP400Q96L91 3159 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 NPY5RQ15761 445 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 SPECC1Q5M775 1068 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 SYTL4Q96C24 671 aaPredicted RBP11.38□□□□□ -0.59
MSH2-202ENST00000406134 KCNJ14Q9UNX9 436 aa11.38□□□□□ -0.59
MSH2-202ENST00000406134 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.596e-7■■■□□ 16.5
MSH2-202ENST00000406134 GOLGA8FQ08AF8 430 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 GOLGA8DPQ0D2H9 430 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 PKN1Q16512 942 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 KRBA2Q6ZNG9 492 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 NAT10Q9H0A0 1025 aaKnown RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 FAM205CA6NFA0 338 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 CBX1P83916 185 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 NR5A1Q13285 461 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 KMT5BQ4FZB7 885 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 USP49Q70CQ1 688 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 ADAMTS3O15072 1205 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 ACTN4O43707 911 aaKnown RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 ZNF18P17022 549 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 APTXQ7Z2E3 356 aaKnown RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
MSH2-202ENST00000406134 SLC26A6Q9BXS9 759 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 ZNF446Q9NWS9 450 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 PCDHB6Q9Y5E3 794 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 PCDHA5Q9Y5H7 936 aa11.37□□□□□ -0.59
MSH2-202ENST00000406134 CUTAO60888 179 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 APPP05067 770 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
MSH2-202ENST00000406134 GSDMDP57764 484 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
MSH2-202ENST00000406134 SYNE3Q6ZMZ3 975 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 CRKLP46109 303 aaKnown RBP11.36□□□□□ -0.59
MSH2-202ENST00000406134 CRACR2BQ8N4Y2 399 aaPredicted RBP11.36□□□□□ -0.59
MSH2-202ENST00000406134 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 CDKL5O76039 1030 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 PTPREP23469 700 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 TRDNQ13061 729 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
MSH2-202ENST00000406134 REXO1L1PQ8IX06 675 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 GRAMD1CQ8IYS0 662 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 ANAPC4Q9UJX5 808 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 MAN1B1Q9UKM7 699 aa11.36□□□□□ -0.59
MSH2-202ENST00000406134 DMTNQ08495 405 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 VSTM4Q8IW00 320 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
MSH2-202ENST00000406134 SMC2O95347 1197 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 CHRNDQ07001 517 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 CCDC112Q8NEF3 446 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 NAPBQ9H115 298 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
MSH2-202ENST00000406134 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
MSH2-202ENST00000406134 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
MSH2-202ENST00000406134 SLC5A1P13866 664 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
MSH2-202ENST00000406134 CCDC150Q8NCX0 1101 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 SDR42E1Q8WUS8 393 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 DDX41Q9UJV9 622 aaKnown RBP11.35□□□□□ -0.59
MSH2-202ENST00000406134 BTAF1O14981 1849 aa11.35□□□□□ -0.59
MSH2-202ENST00000406134 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
MSH2-202ENST00000406134 FGRP09769 529 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 MORC3Q14149 939 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 FOXP1Q9H334 677 aaPredicted RBP11.34□□□□□ -0.59
MSH2-202ENST00000406134 SLC12A7Q9Y666 1083 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
MSH2-202ENST00000406134 MYL5Q02045 173 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
MSH2-202ENST00000406134 FBXO38Q6PIJ6 1188 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 KIF18AQ8NI77 898 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 PPARAQ07869 468 aa11.34□□□□□ -0.59
MSH2-202ENST00000406134 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
MSH2-202ENST00000406134 MARCH10Q8NA82 808 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms