RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 FOXR1Q6PIV2 292 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 DPF2Q92785 391 aa17.21■□□□□ 0.35
ATG4B-206ENST00000405546 KIF1AQ12756 1690 aa17.21■□□□□ 0.34
ATG4B-206ENST00000405546 LCORLQ8N3X6 602 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 RASSF4Q9H2L5 321 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 MRC1P22897 1456 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
ATG4B-206ENST00000405546 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 CDC25BP30305 580 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 GUCY1A2P33402 732 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 GNG11P61952 73 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
ATG4B-206ENST00000405546 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-206ENST00000405546 CMA1P23946 247 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 GYG1P46976 350 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 RTN1Q16799 776 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 TMEM87BQ96K49 555 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 DESI2Q9BSY9 194 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 IRX2Q9BZI1 471 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-206ENST00000405546 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-206ENST00000405546 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
ATG4B-206ENST00000405546 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
ATG4B-206ENST00000405546 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 TMEM232C9JQI7 657 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 UBASH3AP57075 661 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
ATG4B-206ENST00000405546 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
ATG4B-206ENST00000405546 DDB1Q16531 1140 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 VPS18Q9P253 973 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 NLRP12P59046 1061 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 NR5A1Q13285 461 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 WDR24Q96S15 920 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 EPB41L4AQ9HCS5 686 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-206ENST00000405546 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
ATG4B-206ENST00000405546 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 TBC1D8O95759 1140 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 L2HGDHQ9H9P8 463 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 LY9Q9HBG7 655 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 CABP5Q9NP86 173 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-206ENST00000405546 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
ATG4B-206ENST00000405546 GSDMDP57764 484 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 LONRF3Q496Y0 759 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-206ENST00000405546 KLHL10Q6JEL2 608 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 CDHR2Q9BYE9 1310 aa17.17■□□□□ 0.34
ATG4B-206ENST00000405546 FOXN1O15353 648 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 ZRANB2O95218 330 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 FANCCQ00597 558 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 KRT23Q9C075 422 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 H3BQF6 201 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 TXLNBQ8N3L3 684 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 RABEP2Q9H5N1 569 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 ZNF142P52746 1687 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-206ENST00000405546 GSG1L2A8MUP6 293 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 CHRNDQ07001 517 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 GPS2Q13227 327 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 GRAMD1CQ8IYS0 662 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 DCCP43146 1447 aa17.16■□□□□ 0.34
ATG4B-206ENST00000405546 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 ADAMTSL3P82987 1691 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 GPATCH11Q8N954 259 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 ADAM21Q9UKJ8 722 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 TADA3O75528 432 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 AFMP43652 599 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 CC2D1AQ6P1N0 951 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-206ENST00000405546 PARD6BQ9BYG5 372 aa17.15■□□□□ 0.34
ATG4B-206ENST00000405546 ADKP55263 362 aaKnown RBP17.14■□□□□ 0.33
ATG4B-206ENST00000405546 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
ATG4B-206ENST00000405546 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
ATG4B-206ENST00000405546 WASF1Q92558 559 aa17.14■□□□□ 0.33
ATG4B-206ENST00000405546 FANCLQ9NW38 375 aa17.14■□□□□ 0.33
ATG4B-206ENST00000405546 GRIN1Q05586 938 aa17.14■□□□□ 0.33
ATG4B-206ENST00000405546 NOSTRINQ8IVI9 506 aa17.14■□□□□ 0.33
ATG4B-206ENST00000405546 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
ATG4B-206ENST00000405546 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms