RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 MPNDQ8N594 471 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
SMS-202ENST00000404933 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
SMS-202ENST00000404933 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 ZKSCAN3Q9BRR0 538 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 DLEC1Q9Y238 1755 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 SYCE3A1L190 88 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
SMS-202ENST00000404933 RXRAP19793 462 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 USP5P45974 858 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 GUCY1B3Q02153 619 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
SMS-202ENST00000404933 GRIK5Q16478 980 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 IQCA1Q86XH1 822 aa13.78□□□□□ -0.2
SMS-202ENST00000404933 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
SMS-202ENST00000404933 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMS-202ENST00000404933 TNKSO95271 1327 aa13.77□□□□□ -0.2
SMS-202ENST00000404933 STK36Q9NRP7 1315 aa13.77□□□□□ -0.2
SMS-202ENST00000404933 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.2
SMS-202ENST00000404933 GOLGA6L4A6NEF3 574 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 PDE4BQ07343 736 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 PPP2R5BQ15173 497 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 SEC23AQ15436 765 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 NTRK3Q16288 839 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 RTN1Q16799 776 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 MYL10Q9BUA6 226 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
SMS-202ENST00000404933 ECM29Q5VYK3 1845 aa13.77□□□□□ -0.21
SMS-202ENST00000404933 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 PLCG2P16885 1265 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 IFNAR1P17181 557 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 SSRP1Q08945 709 aaKnown RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 C2CD5Q86YS7 1000 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 WASF1Q92558 559 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 RTFDC1Q9BY42 306 aaPredicted RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 MKRN1Q9UHC7 482 aaKnown RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 CDK5RAP2Q96SN8 1893 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 GPR75-ASB3A0A0A6YYF3 556 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 H0YIN7 160 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 BRAPQ7Z569 592 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
SMS-202ENST00000404933 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMS-202ENST00000404933 EYA3Q99504 573 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
SMS-202ENST00000404933 PRDM1O75626 825 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
SMS-202ENST00000404933 CYP2D6P10635 497 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 BTDP43251 543 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 TPRNQ4KMQ1 711 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 IFIT1BQ5T764 474 aaKnown RBP13.75□□□□□ -0.21
SMS-202ENST00000404933 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
SMS-202ENST00000404933 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 PHKBQ93100 1093 aa13.75□□□□□ -0.21
SMS-202ENST00000404933 USP17L8P0C7I0 530 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 CALM1P0DP23 149 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 CALM2P0DP24 149 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 CALM3P0DP25 149 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 GTF2IP78347 998 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 TRIM29Q14134 588 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 ROBO3Q96MS0 1386 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
SMS-202ENST00000404933 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
SMS-202ENST00000404933 GAKO14976 1311 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 MYH6P13533 1939 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 G3V3G9 751 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 KIF23Q02241 960 aaPredicted RBP13.73□□□□□ -0.21
SMS-202ENST00000404933 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
SMS-202ENST00000404933 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 USP28Q96RU2 1077 aa13.73□□□□□ -0.21
SMS-202ENST00000404933 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms