RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
LINC00339-201ENST00000404210 CYP21A2P08686 494 aa14.64□□□□□ -0.07
LINC00339-201ENST00000404210 CYP2D6P10635 497 aa14.64□□□□□ -0.07
LINC00339-201ENST00000404210 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
LINC00339-201ENST00000404210 HOOK2Q96ED9 719 aa14.64□□□□□ -0.07
LINC00339-201ENST00000404210 CYP2D7A0A087X1C5 515 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 FGRP09769 529 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 PCP11498 1178 aaKnown RBP14.63□□□□□ -0.07
LINC00339-201ENST00000404210 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 GABPAQ06546 454 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 NBPF12Q5TAG4 269 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-201ENST00000404210 MAP1SQ66K74 1059 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-201ENST00000404210 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
LINC00339-201ENST00000404210 SERPINB13Q9UIV8 391 aa14.63□□□□□ -0.07
LINC00339-201ENST00000404210 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
LINC00339-201ENST00000404210 ZKSCAN1P17029 563 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-201ENST00000404210 HAND2P61296 217 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 PDE4BQ07343 736 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-201ENST00000404210 STAG1Q8WVM7 1258 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 GLIS2Q9BZE0 524 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-201ENST00000404210 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 RNF41Q9H4P4 317 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-201ENST00000404210 ZNF287Q9HBT7 754 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 SWAP70Q9UH65 585 aa14.62□□□□□ -0.07
LINC00339-201ENST00000404210 ROBO3Q96MS0 1386 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 ADM5C9JUS6 153 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 SMIM22K7EJ46 135 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 CDK8P49336 464 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
LINC00339-201ENST00000404210 NT5C2P49902 561 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 ANAPC15P60006 121 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 EVX2Q03828 476 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 KRT32Q14532 448 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 PRAMEF18Q5VWM3 479 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 RASEFQ8IZ41 740 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 CRACR2BQ8N4Y2 399 aaPredicted RBP14.61□□□□□ -0.07
LINC00339-201ENST00000404210 IL17RAQ96F46 866 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 DYNLL2Q96FJ2 89 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 TRIM34Q9BYJ4 488 aa14.61□□□□□ -0.07
LINC00339-201ENST00000404210 LAMB1P07942 1786 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 E7EWF7 191 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 ITGBL1O95965 494 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-201ENST00000404210 DCAF15Q66K64 600 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00339-201ENST00000404210 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00339-201ENST00000404210 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 TACC3Q9Y6A5 838 aa14.6□□□□□ -0.07
LINC00339-201ENST00000404210 SIPA1L1O43166 1804 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 ORC4O43929 436 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 TOMM70O94826 608 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 NF2P35240 595 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 TRDNQ13061 729 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 MIGA2Q7L4E1 593 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 TBC1D10CQ8IV04 446 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 ZNF444Q8N0Y2 327 aaPredicted RBP14.59□□□□□ -0.07
LINC00339-201ENST00000404210 NCOA7Q8NI08 942 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 RBM46Q8TBY0 533 aaKnown RBP14.59□□□□□ -0.07
LINC00339-201ENST00000404210 CCDC17Q96LX7 622 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 KRT23Q9C075 422 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 CNNM2Q9H8M5 875 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 INCENPQ9NQS7 918 aa14.59□□□□□ -0.07
LINC00339-201ENST00000404210 PSMA5P28066 241 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 SHMT1P34896 483 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 DLK2Q6UY11 383 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 STOX1Q6ZVD7 989 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 SMC1BQ8NDV3 1235 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 TBC1D32Q96NH3 1257 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 DNAJC18Q9H819 358 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 ZNF112Q9UJU3 913 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
LINC00339-201ENST00000404210 PHF20L1A8MW92 1017 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-201ENST00000404210 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-201ENST00000404210 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
LINC00339-201ENST00000404210 SLURP2P0DP57 97 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 RASA1P20936 1047 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 ADCK5Q3MIX3 580 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 CERKLQ49MI3 558 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-201ENST00000404210 SLC44A5Q8NCS7 719 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 ESR2Q92731 530 aa14.57□□□□□ -0.08
LINC00339-201ENST00000404210 TRAF5O00463 557 aa14.56□□□□□ -0.08
LINC00339-201ENST00000404210 PRDM1O75626 825 aa14.56□□□□□ -0.08
LINC00339-201ENST00000404210 MAP3K11Q16584 847 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms