RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 GPAT2Q6NUI2 795 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
TPM1-207ENST00000403994 SIRT2Q8IXJ6 389 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 ARMC5Q96C12 935 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
TPM1-207ENST00000403994 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
TPM1-207ENST00000403994 PPP4CP60510 307 aa18.77■□□□□ 0.6
TPM1-207ENST00000403994 ARHGEF6Q15052 776 aa18.77■□□□□ 0.6
TPM1-207ENST00000403994 C17orf99Q6UX52 265 aa18.77■□□□□ 0.6
TPM1-207ENST00000403994 CPA4Q9UI42 421 aa18.77■□□□□ 0.6
TPM1-207ENST00000403994 PTCH2Q9Y6C5 1203 aa18.77■□□□□ 0.6
TPM1-207ENST00000403994 TRIM75PA6NK02 468 aa18.76■□□□□ 0.59
TPM1-207ENST00000403994 HMMRO75330 724 aa18.76■□□□□ 0.59
TPM1-207ENST00000403994 IDH1O75874 414 aaKnown RBP18.76■□□□□ 0.59
TPM1-207ENST00000403994 KIF22Q14807 665 aa18.76■□□□□ 0.59
TPM1-207ENST00000403994 MAPKAPK5Q8IW41 473 aa18.76■□□□□ 0.59
TPM1-207ENST00000403994 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
TPM1-207ENST00000403994 TGFBRAP1Q8WUH2 860 aa18.76■□□□□ 0.59
TPM1-207ENST00000403994 HERC5Q9UII4 1024 aaKnown RBP18.76■□□□□ 0.59
TPM1-207ENST00000403994 APBB1O00213 710 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 C20orf194Q5TEA3 1177 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 GADL1Q6ZQY3 521 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 FASTKD5Q7L8L6 764 aaKnown RBP18.75■□□□□ 0.59
TPM1-207ENST00000403994 KIF1BPQ96EK5 621 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
TPM1-207ENST00000403994 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
TPM1-207ENST00000403994 CYP2C8P10632 490 aa18.74■□□□□ 0.59
TPM1-207ENST00000403994 CYP7A1P22680 504 aa18.74■□□□□ 0.59
TPM1-207ENST00000403994 CTGFP29279 349 aa18.74■□□□□ 0.59
TPM1-207ENST00000403994 DYNLL1P63167 89 aaKnown RBP18.74■□□□□ 0.59
TPM1-207ENST00000403994 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
TPM1-207ENST00000403994 MAGEB6Q8N7X4 407 aa18.74■□□□□ 0.59
TPM1-207ENST00000403994 MYH7P12883 1935 aa18.74■□□□□ 0.59
TPM1-207ENST00000403994 BCRP11274 1271 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 CAP2P40123 477 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 SLC9C1Q4G0N8 1177 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
TPM1-207ENST00000403994 MIGA1Q8NAN2 632 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
TPM1-207ENST00000403994 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 SLC45A1Q9Y2W3 748 aa18.73■□□□□ 0.59
TPM1-207ENST00000403994 POTEFA5A3E0 1075 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 GNRH1P01148 92 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 MAP3K12Q12852 859 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
TPM1-207ENST00000403994 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 PALD1Q9ULE6 856 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 AGTPBP1Q9UPW5 1226 aa18.72■□□□□ 0.59
TPM1-207ENST00000403994 ECM2O94769 699 aaPredicted RBP18.71■□□□□ 0.59
TPM1-207ENST00000403994 PSMC4P43686 418 aa18.71■□□□□ 0.59
TPM1-207ENST00000403994 TREML2Q5T2D2 321 aa18.71■□□□□ 0.59
TPM1-207ENST00000403994 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
TPM1-207ENST00000403994 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
TPM1-207ENST00000403994 SAP30BPQ9UHR5 308 aaKnown RBP18.71■□□□□ 0.59
TPM1-207ENST00000403994 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
TPM1-207ENST00000403994 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
TPM1-207ENST00000403994 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
TPM1-207ENST00000403994 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
TPM1-207ENST00000403994 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
TPM1-207ENST00000403994 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
TPM1-207ENST00000403994 USP17L5A8MUK1 530 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 OSBPP22059 807 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 HMGCS2P54868 508 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 PRMT2P55345 433 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 SPP2Q13103 211 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
TPM1-207ENST00000403994 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
TPM1-207ENST00000403994 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
TPM1-207ENST00000403994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
TPM1-207ENST00000403994 TRIM34Q9BYJ4 488 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 SRRDQ9UH36 339 aa18.69■□□□□ 0.58
TPM1-207ENST00000403994 GDF11O95390 407 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 ASNSP08243 561 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 PDE6AP16499 860 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 USP5P45974 858 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 JAG1P78504 1218 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 SH3TC2Q8TF17 1288 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
TPM1-207ENST00000403994 RIOK1Q9BRS2 568 aaKnown RBP18.68■□□□□ 0.58
TPM1-207ENST00000403994 MYPNQ86TC9 1320 aa18.68■□□□□ 0.58
TPM1-207ENST00000403994 MYH8P13535 1937 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 GOLIM4O00461 696 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
TPM1-207ENST00000403994 FCGRTP55899 365 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 MTMR2Q13614 643 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 AS3MTQ9HBK9 375 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
TPM1-207ENST00000403994 SH3D19Q5HYK7 790 aa18.66■□□□□ 0.58
TPM1-207ENST00000403994 SLC9C2Q5TAH2 1124 aa18.66■□□□□ 0.58
TPM1-207ENST00000403994 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms