RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AKAP11Q9UKA4 1901 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 ETF1P62495 437 aaKnown RBP22.82■■□□□ 1.24
CCDC47-202ENST00000403162 SLC15A2Q16348 729 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 SHC4Q6S5L8 630 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 PLA2G12BQ9BX93 195 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.82■■□□□ 1.243e-6■□□□□ 8.5
CCDC47-202ENST00000403162 TMX1Q9H3N1 280 aa22.82■■□□□ 1.24
CCDC47-202ENST00000403162 METAP2P50579 478 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCDC47-202ENST00000403162 TERF2Q15554 542 aa22.81■■□□□ 1.24
CCDC47-202ENST00000403162 RESP18Q5W5W9 173 aa22.81■■□□□ 1.24
CCDC47-202ENST00000403162 ZNF446Q9NWS9 450 aa22.81■■□□□ 1.24
CCDC47-202ENST00000403162 PNPLA7Q6ZV29 1317 aa22.81■■□□□ 1.24
CCDC47-202ENST00000403162 SH2B2O14492 632 aaPredicted RBP22.8■■□□□ 1.24
CCDC47-202ENST00000403162 UBASH3AP57075 661 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 NFIXQ14938 502 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 KRT40Q6A162 431 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 MAP3K14Q99558 947 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 RIC1Q4ADV7 1423 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 GTF2E1P29083 439 aaPredicted RBP22.8■■□□□ 1.24
CCDC47-202ENST00000403162 ERCC6LQ2NKX8 1250 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 FCHSD1Q86WN1 690 aa22.8■■□□□ 1.24
CCDC47-202ENST00000403162 NBPF5PQ86XG9 351 aaPredicted RBP22.8■■□□□ 1.24
CCDC47-202ENST00000403162 PDE8AO60658 829 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 CSF1RP07333 972 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 ADD2P35612 726 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 CPLX2Q6PUV4 134 aaKnown RBP22.79■■□□□ 1.24
CCDC47-202ENST00000403162 AIFM3Q96NN9 605 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
CCDC47-202ENST00000403162 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.79■■□□□ 1.24
CCDC47-202ENST00000403162 FAM193AP78312 1265 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 ERFEQ4G0M1 354 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 ISM2Q6H9L7 571 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 APOA5Q6Q788 366 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 PI16Q6UXB8 463 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 CYB5R4Q7L1T6 521 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 HOMER1Q86YM7 354 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 VSTM4Q8IW00 320 aa22.79■■□□□ 1.24
CCDC47-202ENST00000403162 CUTAO60888 179 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 SERPINC1P01008 464 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 CTSWP56202 376 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 TAF7LQ5H9L4 462 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 TBC1D10CQ8IV04 446 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 DPF2Q92785 391 aa22.78■■□□□ 1.24
CCDC47-202ENST00000403162 ZNF512BQ96KM6 892 aaPredicted RBP22.78■■□□□ 1.24
CCDC47-202ENST00000403162 PNOCQ13519 176 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 BMS1Q14692 1282 aaKnown RBP22.77■■□□□ 1.24
CCDC47-202ENST00000403162 TAF3Q5VWG9 929 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 TRIM65Q6PJ69 517 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 ELOA2Q8IYF1 753 aaPredicted RBP22.77■■□□□ 1.24
CCDC47-202ENST00000403162 LRRN4CLQ8ND94 238 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 NPHP1O15259 732 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 MCAMP43121 646 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 IFIT5Q13325 482 aaKnown RBP22.77■■□□□ 1.24
CCDC47-202ENST00000403162 OLFM4Q6UX06 510 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 TMEM87BQ96K49 555 aa22.77■■□□□ 1.24
CCDC47-202ENST00000403162 SRRTQ9BXP5 876 aaKnown RBP22.77■■□□□ 1.24
CCDC47-202ENST00000403162 CDC27P30260 824 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 GNL2Q13823 731 aaKnown RBP22.76■■□□□ 1.23
CCDC47-202ENST00000403162 CFAP100Q494V2 611 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 TPTE2Q6XPS3 522 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 METTL16Q86W50 562 aaKnown RBP22.76■■□□□ 1.23
CCDC47-202ENST00000403162 COL24A1Q17RW2 1714 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
CCDC47-202ENST00000403162 NTRK3Q16288 839 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 TTLL11Q8NHH1 800 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 DNAI1Q9UI46 699 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 DENND2AQ9ULE3 1009 aa22.76■■□□□ 1.23
CCDC47-202ENST00000403162 CCDC102BQ68D86 513 aa22.75■■□□□ 1.23
CCDC47-202ENST00000403162 KRBA2Q6ZNG9 492 aa22.75■■□□□ 1.23
CCDC47-202ENST00000403162 CREBRFQ8IUR6 639 aa22.75■■□□□ 1.23
CCDC47-202ENST00000403162 REXO1L1PQ8IX06 675 aa22.75■■□□□ 1.23
CCDC47-202ENST00000403162 RIPOR2Q9Y4F9 1068 aa22.75■■□□□ 1.23
CCDC47-202ENST00000403162 TM4SF1P30408 202 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 UBE3CQ15386 1083 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 UPF1Q92900 1129 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCDC47-202ENST00000403162 STK36Q9NRP7 1315 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 ZBTB43O43298 467 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 TOP1P11387 765 aaKnown RBP22.74■■□□□ 1.23
CCDC47-202ENST00000403162 CLCN6P51797 869 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 TRIM29Q14134 588 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 ARHGAP29Q52LW3 1261 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 SLC9C2Q5TAH2 1124 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 SGMS1Q86VZ5 419 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 NLGN1Q8N2Q7 840 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 CCDC24Q8N4L8 307 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 IGDCC4Q8TDY8 1250 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 PHKBQ93100 1093 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 CLIC6Q96NY7 704 aa22.74■■□□□ 1.23
CCDC47-202ENST00000403162 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCDC47-202ENST00000403162 ZSCAN12O43309 604 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 IARSP41252 1262 aaKnown RBP22.73■■□□□ 1.23
CCDC47-202ENST00000403162 LONRF3Q496Y0 759 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 METTL24Q5JXM2 366 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 TMEM139Q8IV31 216 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 GREM2Q9H772 168 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 KCNH3Q9ULD8 1083 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 FHOD1Q9Y613 1164 aa22.73■■□□□ 1.23
CCDC47-202ENST00000403162 ARHGAP6O43182 974 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms