RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ZSCAN10Q96SZ4 725 aaPredicted RBP15.58■□□□□ 0.08
CEACAM1-206ENST00000403136 BAZ2AQ9UIF9 1905 aaKnown RBP15.58■□□□□ 0.08
CEACAM1-206ENST00000403136 VPS37CA5D8V6 355 aaPredicted RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 METAP2P50579 478 aaKnown RBP eCLIP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 PLCD1P51178 756 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 HDLBPQ00341 1268 aaKnown RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 SEC23AQ15436 765 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 IQCA1Q86XH1 822 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 KIAA0825Q8IV33 1275 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 USP40Q9NVE5 1235 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 PPP1R1BQ9UD71 204 aaPredicted RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 SAP30BPQ9UHR5 308 aaKnown RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 CD2APQ9Y5K6 639 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 FLT1P17948 1338 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 YDJCA8MPS7 323 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 CPLX1O14810 134 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 TRAK2O60296 914 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 CRKP46108 304 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 APOBEC3HQ6NTF7 200 aaKnown RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 LARGE2Q8N3Y3 721 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 DYNLL2Q96FJ2 89 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 ZNF277Q9NRM2 450 aaPredicted RBP15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 ATP6V1DQ9Y5K8 247 aa15.57■□□□□ 0.08
CEACAM1-206ENST00000403136 TNKSO95271 1327 aa15.56■□□□□ 0.08
CEACAM1-206ENST00000403136 FDPSP14324 419 aaKnown RBP15.56■□□□□ 0.08
CEACAM1-206ENST00000403136 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
CEACAM1-206ENST00000403136 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
CEACAM1-206ENST00000403136 KIF13BQ9NQT8 1826 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 RXRAP19793 462 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 CDC27P30260 824 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 SKOR2Q2VWA4 1001 aaPredicted RBP15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 FAM47AQ5JRC9 791 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 CDC42EP5Q6NZY7 148 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 CPLX2Q6PUV4 134 aaKnown RBP15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 MICU3Q86XE3 530 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 ENAHQ8N8S7 591 aaPredicted RBP15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 FAM217BQ9NTX9 383 aaPredicted RBP15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
CEACAM1-206ENST00000403136 GOLGA8AA7E2F4 631 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 PPFIA3O75145 1194 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 WDHD1O75717 1129 aaPredicted RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 PTGER2P43116 358 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 RCAN1P53805 252 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 CDC37L1Q7L3B6 337 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 MYL10Q9BUA6 226 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 ZNF287Q9HBT7 754 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 LMBRD1Q9NUN5 540 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 SERPINA10Q9UK55 444 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 TSPY2A6NKD2 308 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 H3BQV1 296 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 PRPF40AO75400 957 aaKnown RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 CDKL5O76039 1030 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 TFAP4Q01664 338 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 IFFO2Q5TF58 517 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 CCDC144CPQ8IYA2 1237 aa15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 ZNF444Q8N0Y2 327 aaPredicted RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 ORC3Q9UBD5 711 aaPredicted RBP15.54■□□□□ 0.08
CEACAM1-206ENST00000403136 PICALMQ13492 652 aa15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 NTRK3Q16288 839 aa15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 KLHL34Q8N239 644 aa15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
CEACAM1-206ENST00000403136 VIL1P09327 827 aaKnown RBP15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 CDK8P49336 464 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 RBM5P52756 815 aaKnown RBP eCLIP15.52■□□□□ 0.083e-7■■□□□ 14.5
CEACAM1-206ENST00000403136 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 RSBN1LQ6PCB5 846 aaPredicted RBP15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 TTC6Q86TZ1 520 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 FANCBQ8NB91 859 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 ZNRF3Q9ULT6 936 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 SCN9AQ15858 1988 aa15.52■□□□□ 0.08
CEACAM1-206ENST00000403136 NID2Q14112 1375 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 CCDC196A0A1B0GTZ2 297 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 NMT2O60551 498 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 RAD17O75943 681 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 RTN1Q16799 776 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 CCDC178Q5BJE1 867 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 SLC44A5Q8NCS7 719 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 NUP133Q8WUM0 1156 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 TCP11L1Q9NUJ3 509 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.07
CEACAM1-206ENST00000403136 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
CEACAM1-206ENST00000403136 PSMD14O00487 310 aa15.51■□□□□ 0.07
CEACAM1-206ENST00000403136 IFNAR1P17181 557 aa15.51■□□□□ 0.07
CEACAM1-206ENST00000403136 RASA1P20936 1047 aa15.51■□□□□ 0.07
CEACAM1-206ENST00000403136 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
CEACAM1-206ENST00000403136 NIM1KQ8IY84 436 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms