RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 POLR3DP05423 398 aaPredicted RBP31.95■■■□□ 2.71
CGREF1-204ENST00000402550 SLURP2P0DP57 97 aa31.95■■■□□ 2.71
CGREF1-204ENST00000402550 MCCP23508 829 aa31.95■■■□□ 2.71
CGREF1-204ENST00000402550 PLCD1P51178 756 aa31.95■■■□□ 2.71
CGREF1-204ENST00000402550 CTR9Q6PD62 1173 aa31.95■■■□□ 2.71
CGREF1-204ENST00000402550 USP26Q9BXU7 913 aa31.95■■■□□ 2.71
CGREF1-204ENST00000402550 RBM8AQ9Y5S9 174 aaKnown RBP31.95■■■□□ 2.71
CGREF1-204ENST00000402550 FOXP4Q8IVH2 680 aaPredicted RBP31.94■■■□□ 2.7
CGREF1-204ENST00000402550 ARPP21Q9UBL0 812 aaPredicted RBP31.94■■■□□ 2.7
CGREF1-204ENST00000402550 HLA-DOAP06340 250 aa31.94■■■□□ 2.7
CGREF1-204ENST00000402550 FKBP1BP68106 108 aa31.94■■■□□ 2.7
CGREF1-204ENST00000402550 DCAF15Q66K64 600 aa31.94■■■□□ 2.7
CGREF1-204ENST00000402550 MOB2Q70IA6 237 aa31.94■■■□□ 2.7
CGREF1-204ENST00000402550 TBC1D12O60347 775 aa31.93■■■□□ 2.7
CGREF1-204ENST00000402550 TTLL12Q14166 644 aaPredicted RBP31.93■■■□□ 2.7
CGREF1-204ENST00000402550 DDX60LQ5H9U9 1706 aaKnown RBP31.93■■■□□ 2.7
CGREF1-204ENST00000402550 C12orf60Q5U649 245 aa31.93■■■□□ 2.7
CGREF1-204ENST00000402550 RNF20Q5VTR2 975 aa31.93■■■□□ 2.7
CGREF1-204ENST00000402550 METTL16Q86W50 562 aaKnown RBP31.93■■■□□ 2.7
CGREF1-204ENST00000402550 LAMB1P07942 1786 aa31.92■■■□□ 2.7
CGREF1-204ENST00000402550 LAMA4Q16363 1823 aa31.92■■■□□ 2.7
CGREF1-204ENST00000402550 CYP2D6P10635 497 aa31.92■■■□□ 2.7
CGREF1-204ENST00000402550 EVX2Q03828 476 aa31.92■■■□□ 2.7
CGREF1-204ENST00000402550 IMMTQ16891 758 aaKnown RBP31.92■■■□□ 2.7
CGREF1-204ENST00000402550 SBK1Q52WX2 424 aa31.92■■■□□ 2.7
CGREF1-204ENST00000402550 ANGEL1Q9UNK9 670 aaKnown RBP31.92■■■□□ 2.7
CGREF1-204ENST00000402550 CYP2D7A0A087X1C5 515 aa31.91■■■□□ 2.7
CGREF1-204ENST00000402550 MAP3K11Q16584 847 aa31.91■■■□□ 2.7
CGREF1-204ENST00000402550 ARMC9Q7Z3E5 817 aa31.91■■■□□ 2.7
CGREF1-204ENST00000402550 KLRG1Q96E93 195 aa31.91■■■□□ 2.7
CGREF1-204ENST00000402550 EHD4Q9H223 541 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 HERC5Q9UII4 1024 aaKnown RBP31.9■■■□□ 2.7
CGREF1-204ENST00000402550 SERPINB13Q9UIV8 391 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 SIPA1L1O43166 1804 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 FAM196BA6NMK8 535 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 UBE2Q2LH0YL09 131 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 ZNF213O14771 459 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 SAPCD2Q86UD0 394 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 ZNF341Q9BYN7 854 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.9■■■□□ 2.7
CGREF1-204ENST00000402550 CREBZFQ9NS37 354 aa31.9■■■□□ 2.7
CGREF1-204ENST00000402550 MINDY4BA8MYZ0 360 aa31.89■■■□□ 2.7
CGREF1-204ENST00000402550 SMIM22K7EJ46 135 aa31.89■■■□□ 2.7
CGREF1-204ENST00000402550 NECTIN1Q15223 517 aa31.89■■■□□ 2.7
CGREF1-204ENST00000402550 CRACR2BQ8N4Y2 399 aaPredicted RBP31.89■■■□□ 2.7
CGREF1-204ENST00000402550 PAPPA2Q9BXP8 1791 aa31.88■■■□□ 2.69
CGREF1-204ENST00000402550 HSPA4P34932 840 aa31.88■■■□□ 2.69
CGREF1-204ENST00000402550 IREB2P48200 963 aaKnown RBP31.88■■■□□ 2.69
CGREF1-204ENST00000402550 DNAJC18Q9H819 358 aa31.88■■■□□ 2.69
CGREF1-204ENST00000402550 ZNF112Q9UJU3 913 aa31.88■■■□□ 2.69
CGREF1-204ENST00000402550 TLL2Q9Y6L7 1015 aa31.88■■■□□ 2.69
CGREF1-204ENST00000402550 ZKSCAN1P17029 563 aaPredicted RBP31.87■■■□□ 2.69
CGREF1-204ENST00000402550 LDLRAD1Q5T700 205 aa31.87■■■□□ 2.69
CGREF1-204ENST00000402550 PHF20L1A8MW92 1017 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 SLC3A2P08195 630 aaKnown RBP31.86■■■□□ 2.69
CGREF1-204ENST00000402550 HSPA6P17066 643 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 HUNKP57058 714 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 GABPAQ06546 454 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 PPARAQ07869 468 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 CREB3L3Q68CJ9 461 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.86■■■□□ 2.69
CGREF1-204ENST00000402550 C22orf23Q9BZE7 217 aa31.86■■■□□ 2.69
CGREF1-204ENST00000402550 ABT1Q9ULW3 272 aaKnown RBP31.86■■■□□ 2.69
CGREF1-204ENST00000402550 HAND2P61296 217 aa31.85■■■□□ 2.69
CGREF1-204ENST00000402550 WRNIP1Q96S55 665 aa31.85■■■□□ 2.69
CGREF1-204ENST00000402550 MAP3K9P80192 1104 aa31.85■■■□□ 2.69
CGREF1-204ENST00000402550 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.85■■■□□ 2.69
CGREF1-204ENST00000402550 DYNLL2Q96FJ2 89 aa31.85■■■□□ 2.69
CGREF1-204ENST00000402550 TRIM34Q9BYJ4 488 aa31.85■■■□□ 2.69
CGREF1-204ENST00000402550 SLC27A2O14975 620 aa31.84■■■□□ 2.69
CGREF1-204ENST00000402550 CYP21A2P08686 494 aa31.84■■■□□ 2.69
CGREF1-204ENST00000402550 UNCXA6NJT0 531 aa31.83■■■□□ 2.69
CGREF1-204ENST00000402550 INPP5BP32019 993 aa31.83■■■□□ 2.69
CGREF1-204ENST00000402550 ANKRD13AQ8IZ07 590 aa31.83■■■□□ 2.69
CGREF1-204ENST00000402550 ZKSCAN4Q969J2 545 aaPredicted RBP31.83■■■□□ 2.69
CGREF1-204ENST00000402550 HTRA3P83110 453 aa31.82■■■□□ 2.68
CGREF1-204ENST00000402550 TATDN1Q6P1N9 297 aa31.82■■■□□ 2.68
CGREF1-204ENST00000402550 ANAPC4Q9UJX5 808 aa31.82■■■□□ 2.68
CGREF1-204ENST00000402550 TAOK2Q9UL54 1235 aa31.82■■■□□ 2.68
CGREF1-204ENST00000402550 MYH8P13535 1937 aa31.82■■■□□ 2.68
CGREF1-204ENST00000402550 RRP1BQ14684 758 aaKnown RBP31.81■■■□□ 2.68
CGREF1-204ENST00000402550 SHMT1P34896 483 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 C16orf86Q6ZW13 317 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 SLC44A5Q8NCS7 719 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 CLMNQ96JQ2 1002 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 RNF41Q9H4P4 317 aaPredicted RBP31.81■■■□□ 2.68
CGREF1-204ENST00000402550 ZNF287Q9HBT7 754 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 SWAP70Q9UH65 585 aa31.81■■■□□ 2.68
CGREF1-204ENST00000402550 CTNND1O60716 968 aaKnown RBP31.8■■■□□ 2.68
CGREF1-204ENST00000402550 CDK8P49336 464 aa31.8■■■□□ 2.68
CGREF1-204ENST00000402550 VGLL4Q14135 290 aa31.8■■■□□ 2.68
CGREF1-204ENST00000402550 HHIPL1Q96JK4 782 aa31.8■■■□□ 2.68
CGREF1-204ENST00000402550 ANAPC15P60006 121 aa31.79■■■□□ 2.68
CGREF1-204ENST00000402550 CTDSPL2Q05D32 466 aa31.79■■■□□ 2.68
CGREF1-204ENST00000402550 PDE4BQ07343 736 aa31.79■■■□□ 2.68
CGREF1-204ENST00000402550 KRT32Q14532 448 aa31.79■■■□□ 2.68
CGREF1-204ENST00000402550 STK11IPQ8N1F8 1099 aa31.79■■■□□ 2.68
CGREF1-204ENST00000402550 ROBO3Q96MS0 1386 aa31.78■■■□□ 2.68
CGREF1-204ENST00000402550 PCP11498 1178 aaKnown RBP31.78■■■□□ 2.68
CGREF1-204ENST00000402550 CAP2P40123 477 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms