RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 CCDC84Q86UT8 332 aaPredicted RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 SCYL3Q8IZE3 742 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.77
USP16-202ENST00000399973 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 MCOLN1Q9GZU1 580 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.21□□□□□ -0.77
USP16-202ENST00000399973 ZNF112Q9UJU3 913 aa10.21□□□□□ -0.77
USP16-202ENST00000399973 MAGEB6P1A0A0J9YX57 407 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 HLA-DOAP06340 250 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 ATP5JP18859 108 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 PPP4CP60510 307 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 PPATQ06203 517 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 ABHD8Q96I13 439 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 PTPN18Q99952 460 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.788e-8■□□□□ 11.1
USP16-202ENST00000399973 R3HDMLQ9H3Y0 253 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 ECHDC1Q9NTX5 307 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
USP16-202ENST00000399973 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
USP16-202ENST00000399973 MGAMO43451 1857 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
USP16-202ENST00000399973 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 IGSF3O75054 1194 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 FKTNO75072 461 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 GADL1Q6ZQY3 521 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 CTU1Q7Z7A3 348 aaKnown RBP10.19□□□□□ -0.78
USP16-202ENST00000399973 CERS3Q8IU89 383 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 HAUS7Q99871 368 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 DHX36Q9H2U1 1008 aaKnown RBP10.19□□□□□ -0.78
USP16-202ENST00000399973 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
USP16-202ENST00000399973 ZHX2Q9Y6X8 837 aa10.19□□□□□ -0.78
USP16-202ENST00000399973 TRIM75PA6NK02 468 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 CCDC85CA6NKD9 419 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 ABCB7O75027 752 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
USP16-202ENST00000399973 MBD4O95243 580 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 LCORLQ8N3X6 602 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 CFHR5Q9BXR6 569 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 CRNKL1Q9BZJ0 848 aaKnown RBP10.18□□□□□ -0.78
USP16-202ENST00000399973 ARMT1Q9H993 441 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 ZFYVE28Q9HCC9 887 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 PI4KBQ9UBF8 816 aa10.18□□□□□ -0.78
USP16-202ENST00000399973 TCRBV5S4A2TA0A5A2 114 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 BTBD19C9JJ37 291 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 TBC1D12O60347 775 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 CTNND1O60716 968 aaKnown RBP10.17□□□□□ -0.78
USP16-202ENST00000399973 GDF11O95390 407 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 PTPRAP18433 802 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 ADD2P35612 726 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 ZSCAN25Q6NSZ9 544 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 TMED8Q6PL24 325 aaPredicted RBP10.17□□□□□ -0.78
USP16-202ENST00000399973 EXOC6Q8TAG9 804 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 CD99L2Q8TCZ2 262 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 OTUD7AQ8TE49 926 aaPredicted RBP10.17□□□□□ -0.78
USP16-202ENST00000399973 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 RIOK1Q9BRS2 568 aaKnown RBP10.17□□□□□ -0.78
USP16-202ENST00000399973 KCNH4Q9UQ05 1017 aa10.17□□□□□ -0.78
USP16-202ENST00000399973 SUPT16HQ9Y5B9 1047 aaKnown RBP10.17□□□□□ -0.78
USP16-202ENST00000399973 PDHXO00330 501 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 CHGBP05060 677 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 CAP2P40123 477 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 IRX6P78412 446 aaPredicted RBP10.16□□□□□ -0.78
USP16-202ENST00000399973 MAP3K10Q02779 954 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
USP16-202ENST00000399973 NOM1Q5C9Z4 860 aaKnown RBP10.16□□□□□ -0.78
USP16-202ENST00000399973 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 ANKRD23Q86SG2 305 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 DNAJC18Q9H819 358 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 MCM9Q9NXL9 1143 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 TRIM17Q9Y577 477 aa10.16□□□□□ -0.78
USP16-202ENST00000399973 TTC41PQ6P2S7 1318 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 A0A0G2JLL6 359 aaPredicted RBP10.15□□□□□ -0.78
USP16-202ENST00000399973 CXCL11O14625 94 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 ERC2O15083 957 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 POLR3DP05423 398 aaPredicted RBP10.15□□□□□ -0.78
USP16-202ENST00000399973 MX1P20591 662 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 SP3Q02447 781 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 SHROOM1Q2M3G4 852 aaPredicted RBP10.15□□□□□ -0.78
USP16-202ENST00000399973 PRRT2Q7Z6L0 340 aaPredicted RBP10.15□□□□□ -0.78
USP16-202ENST00000399973 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 PARK7Q99497 189 aaKnown RBP10.15□□□□□ -0.78
USP16-202ENST00000399973 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 CPA4Q9UI42 421 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 SERPINB13Q9UIV8 391 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
USP16-202ENST00000399973 USP17L5A8MUK1 530 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 PRKAB2O43741 272 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 ASNSP08243 561 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 CYP2C8P10632 490 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 CYP2D6P10635 497 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 HMGCS2P54868 508 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 SPP2Q13103 211 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms