RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 INTS13Q9NVM9 706 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 MAP2K7O14733 419 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 ATP5JP18859 108 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 CDC27P30260 824 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 KCNQ4P56696 695 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 NCAPGQ9BPX3 1015 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 CCDC57Q2TAC2 916 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 SPECC1LQ69YQ0 1117 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 ATL3Q6DD88 541 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 TMEM139Q8IV31 216 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 TC2NQ8N9U0 490 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 SNAP23O00161 211 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
PTPRA-205ENST00000399903 TSGA10IPQ3SY00 556 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 TTC19Q6DKK2 380 aaPredicted RBP19.44■□□□□ 0.7
PTPRA-205ENST00000399903 CRYBG1Q9Y4K1 1723 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 STRCQ7RTU9 1775 aa19.44■□□□□ 0.7
PTPRA-205ENST00000399903 DNAJC21Q5F1R6 531 aaKnown RBP19.43■□□□□ 0.7
PTPRA-205ENST00000399903 SMIM5Q71RC9 77 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 PPFIBP1Q86W92 1011 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 STX10O60499 249 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 COBLO75128 1261 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 RNF40O75150 1001 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 HMGB1P09429 215 aaKnown RBP19.43■□□□□ 0.7
PTPRA-205ENST00000399903 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 GRAMD1CQ8IYS0 662 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 SLC35F6Q8N357 371 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 SMARCC1Q92922 1105 aaPredicted RBP19.43■□□□□ 0.7
PTPRA-205ENST00000399903 SAMSN1Q9NSI8 373 aaKnown RBP19.43■□□□□ 0.7
PTPRA-205ENST00000399903 CTAGE15A4D2H0 777 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 CTAGE8P0CG41 777 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 TCIRG1Q13488 830 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 CTAGE6Q86UF2 777 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 CTAGE4Q8IX94 777 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 CEP112Q8N8E3 955 aa19.43■□□□□ 0.7
PTPRA-205ENST00000399903 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
PTPRA-205ENST00000399903 ZNF609O15014 1411 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 EYA2O00167 538 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 USPL1Q5W0Q7 1092 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 NCAPH2Q6IBW4 605 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 CDC23Q9UJX2 597 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 LRRIQ3A6PVS8 624 aaPredicted RBP19.42■□□□□ 0.7
PTPRA-205ENST00000399903 IFIT1P09914 478 aaKnown RBP19.42■□□□□ 0.7
PTPRA-205ENST00000399903 CCT5P48643 541 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 YY1AP1Q9H869 796 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 MRC1P22897 1456 aa19.42■□□□□ 0.7
PTPRA-205ENST00000399903 CTAGE9A4FU28 777 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 EXOC5O00471 708 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 YEATS4O95619 227 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 CMA1P23946 247 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 CORO7P57737 925 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 SCARF1Q14162 830 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 AFAP1L1Q8TED9 768 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 ACBD3Q9H3P7 528 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 L1RE1Q9UN81 338 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
PTPRA-205ENST00000399903 WASHC4Q2M389 1173 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 FCHSD1Q86WN1 690 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 NOA1Q8NC60 698 aaKnown RBP19.41■□□□□ 0.7
PTPRA-205ENST00000399903 ACRBPQ8NEB7 543 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 MKRN1Q9UHC7 482 aaKnown RBP19.41■□□□□ 0.7
PTPRA-205ENST00000399903 FKBP15Q5T1M5 1219 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 CEP126Q9P2H0 1117 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 HOOK1Q9UJC3 728 aaKnown RBP19.41■□□□□ 0.7
PTPRA-205ENST00000399903 NEDD4P46934 1319 aa19.41■□□□□ 0.7
PTPRA-205ENST00000399903 STARD3NLO95772 234 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 PPARDQ03181 441 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 GSPT2Q8IYD1 628 aaKnown RBP19.4■□□□□ 0.7
PTPRA-205ENST00000399903 CAPZA3Q96KX2 299 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 ABL1P00519 1130 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 FBXW10Q5XX13 1052 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 HAUS7Q99871 368 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 BRMS1Q9HCU9 246 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 POLR3EQ9NVU0 708 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 TEX33O43247 280 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 FMR1Q06787 632 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■■■□ 22.7
PTPRA-205ENST00000399903 RAD9BQ6WBX8 426 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 GREM2Q9H772 168 aa19.4■□□□□ 0.7
PTPRA-205ENST00000399903 AKR1B15C9JRZ8 316 aaPredicted RBP19.39■□□□□ 0.69
PTPRA-205ENST00000399903 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 TADA2BQ86TJ2 420 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 FOXP4Q8IVH2 680 aaPredicted RBP19.39■□□□□ 0.69
PTPRA-205ENST00000399903 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 ERLIN2O94905 339 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 FAM71BQ8TC56 605 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
PTPRA-205ENST00000399903 KCPQ6ZWJ8 1503 aa19.39■□□□□ 0.69
PTPRA-205ENST00000399903 ENC1O14682 589 aa19.38■□□□□ 0.69
PTPRA-205ENST00000399903 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
PTPRA-205ENST00000399903 IL15P40933 162 aaPredicted RBP19.38■□□□□ 0.69
PTPRA-205ENST00000399903 METTL16Q86W50 562 aaKnown RBP19.38■□□□□ 0.69
PTPRA-205ENST00000399903 PHKBQ93100 1093 aa19.38■□□□□ 0.69
PTPRA-205ENST00000399903 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
PTPRA-205ENST00000399903 H0YHG0 523 aa19.38■□□□□ 0.69
PTPRA-205ENST00000399903 IGSF22Q8N9C0 903 aa19.38■□□□□ 0.69
PTPRA-205ENST00000399903 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
PTPRA-205ENST00000399903 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms