RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 MAGED2Q9UNF1 606 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 PFDN1O60925 122 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 SERPINI2O75830 405 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
CACNA1C-217ENST00000399641 OSBPP22059 807 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 TAB3Q8N5C8 712 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 OCM2P0CE71 109 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
CACNA1C-217ENST00000399641 MAEAQ7L5Y9 396 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 EBAG9O00559 213 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 SEL1L2Q5TEA6 688 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 ZFYVE19Q96K21 471 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 KRT82Q9NSB4 513 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 SORBS3O60504 671 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 ANXA1P04083 346 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 HLA-DPA1P20036 260 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 EFCC1Q9HA90 598 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 STRN3Q13033 797 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 TRPC3Q13507 836 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 MX1P20591 662 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 SYTL2Q9HCH5 934 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
CACNA1C-217ENST00000399641 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 LBHD1Q9BQE6 289 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 STX1AQ16623 288 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 HIF1AQ16665 826 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 PNMA8AQ86V59 439 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 HAUS2Q9NVX0 235 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 UBASH3AP57075 661 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 NBNO60934 754 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 CCNA1P78396 465 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 UBE3AQ05086 875 aa12.36□□□□□ -0.43
CACNA1C-217ENST00000399641 RAD50Q92878 1312 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 TSNAXIP1Q2TAA8 658 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 GSTA1P08263 222 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 GSTA2P09210 222 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 KRT222Q8N1A0 295 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 METTL13Q8N6R0 699 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 FNBP1Q96RU3 617 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
CACNA1C-217ENST00000399641 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms