RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 HLTFQ14527 1009 aaKnown RBP eCLIP16.77■□□□□ 0.27
ITSN1-210ENST00000399353 TRIM6Q9C030 488 aaPredicted RBP16.77■□□□□ 0.27
ITSN1-210ENST00000399353 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.27
ITSN1-210ENST00000399353 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 GUCY2FP51841 1108 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 POSTNQ15063 836 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 SWT1Q5T5J6 900 aaKnown RBP16.76■□□□□ 0.27
ITSN1-210ENST00000399353 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 MMS19Q96T76 1030 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 HPCAL4Q9UM19 191 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 ERCC6L2Q5T890 1561 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 TUBBP07437 444 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 CXCR5P32302 372 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
ITSN1-210ENST00000399353 COG1Q8WTW3 980 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 TACO1Q9BSH4 297 aaKnown RBP16.76■□□□□ 0.27
ITSN1-210ENST00000399353 EDC4Q6P2E9 1401 aaKnown RBP16.76■□□□□ 0.27
ITSN1-210ENST00000399353 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
ITSN1-210ENST00000399353 SEC24CP53992 1094 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 TIMM10P62072 90 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 SLC26A6Q9BXS9 759 aa16.76■□□□□ 0.27
ITSN1-210ENST00000399353 ZNF185O15231 689 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 GUCY1A3Q02108 690 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 ZNHIT6Q9NWK9 470 aaKnown RBP16.75■□□□□ 0.27
ITSN1-210ENST00000399353 HGSO14964 777 aaPredicted RBP16.75■□□□□ 0.27
ITSN1-210ENST00000399353 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 BRAPQ7Z569 592 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 SMARCC2Q8TAQ2 1214 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 MTMR7Q9Y216 660 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 RIPOR2Q9Y4F9 1068 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 KIF1BO60333 1816 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 SYF2O95926 243 aaKnown RBP16.75■□□□□ 0.27
ITSN1-210ENST00000399353 UBXN1Q04323 297 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
ITSN1-210ENST00000399353 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 JAKMIP2Q96AA8 810 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 KLC4Q9NSK0 619 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
ITSN1-210ENST00000399353 CPSF2Q9P2I0 782 aaKnown RBP16.75■□□□□ 0.27
ITSN1-210ENST00000399353 ARHGAP25P42331 645 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
ITSN1-210ENST00000399353 KCNV1Q6PIU1 500 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
ITSN1-210ENST00000399353 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
ITSN1-210ENST00000399353 ENO4A6NNW6 628 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 PPARAQ07869 468 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 FMNL3Q8IVF7 1028 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 MAN1B1Q9UKM7 699 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 CALR3Q96L12 384 aaKnown RBP16.74■□□□□ 0.27
ITSN1-210ENST00000399353 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
ITSN1-210ENST00000399353 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.27
ITSN1-210ENST00000399353 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 KRT40Q6A162 431 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 SHC4Q6S5L8 630 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 IDH1O75874 414 aaKnown RBP16.73■□□□□ 0.27
ITSN1-210ENST00000399353 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 POLR3EQ9NVU0 708 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
ITSN1-210ENST00000399353 METTL16Q86W50 562 aaKnown RBP16.73■□□□□ 0.27
ITSN1-210ENST00000399353 MSANTD4Q8NCY6 345 aa16.73■□□□□ 0.27
ITSN1-210ENST00000399353 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 SNCBQ16143 134 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 RNF217Q8TC41 542 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 TUBB4BP68371 445 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 CKAP4Q07065 602 aaKnown RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 KRI1Q8N9T8 703 aaKnown RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 UBAC1Q9BSL1 405 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 RAB21Q9UL25 225 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 CTNND2Q9UQB3 1225 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 MPHOSPH10O00566 681 aaKnown RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 BUB1BO60566 1050 aaPredicted RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 ATP1A1P05023 1023 aaKnown RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 PDHBP11177 359 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 FDPSP14324 419 aaKnown RBP16.72■□□□□ 0.27
ITSN1-210ENST00000399353 ERCC3P19447 782 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 CDC25CP30307 473 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 USP14P54578 494 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 IQCEQ6IPM2 695 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 TMTC1Q8IUR5 882 aa16.72■□□□□ 0.27
ITSN1-210ENST00000399353 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms