RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
LINC00243-201ENST00000399196 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 USP5P45974 858 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
LINC00243-201ENST00000399196 APOA5Q6Q788 366 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 ZKSCAN3Q9BRR0 538 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 ATP8A2Q9NTI2 1148 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 ATP6V1DQ9Y5K8 247 aa11.04□□□□□ -0.64
LINC00243-201ENST00000399196 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 MRE11P49959 708 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
LINC00243-201ENST00000399196 CERS3Q8IU89 383 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00243-201ENST00000399196 FHDC1Q9C0D6 1143 aaPredicted RBP11.03□□□□□ -0.64
LINC00243-201ENST00000399196 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
LINC00243-201ENST00000399196 MROH7-TTC4A0A0A0MT08 1334 aa11.03□□□□□ -0.64
LINC00243-201ENST00000399196 USP17L12C9JPN9 530 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 USP17L21D6R901 530 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 C21orf2O43822 256 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 UBE2HP62256 183 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.64
LINC00243-201ENST00000399196 CC2D2BQ6DHV5 1058 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 SGMS1Q86VZ5 419 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 TTLL6Q8N841 843 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 TMEM87BQ96K49 555 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 RBSNQ9H1K0 784 aa11.02□□□□□ -0.64
LINC00243-201ENST00000399196 CDK5RAP2Q96SN8 1893 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 ERICH2A1L162 156 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 IFIT3O14879 490 aaKnown RBP11.02□□□□□ -0.65
LINC00243-201ENST00000399196 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.65
LINC00243-201ENST00000399196 BTDP43251 543 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 NTRK3Q16288 839 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 TMEM67Q5HYA8 995 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 CTR9Q6PD62 1173 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 PODNQ7Z5L7 613 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 SUPT20HQ8NEM7 779 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
LINC00243-201ENST00000399196 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 ARPP21Q9UBL0 812 aaPredicted RBP11.02□□□□□ -0.65
LINC00243-201ENST00000399196 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
LINC00243-201ENST00000399196 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
LINC00243-201ENST00000399196 H3BQV1 296 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
LINC00243-201ENST00000399196 RANBP6O60518 1105 aaKnown RBP11.01□□□□□ -0.65
LINC00243-201ENST00000399196 PLCG2P16885 1265 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 KRT85P78386 507 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 LEO1Q8WVC0 666 aaPredicted RBP11.01□□□□□ -0.65
LINC00243-201ENST00000399196 ESR2Q92731 530 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 PGBD1Q96JS3 809 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 ISY1Q9ULR0 285 aaKnown RBP11.01□□□□□ -0.65
LINC00243-201ENST00000399196 SUGT1Q9Y2Z0 365 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 LAMB1P07942 1786 aa11.01□□□□□ -0.65
LINC00243-201ENST00000399196 PRDM1O75626 825 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 CYP2D6P10635 497 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 LIFRP42702 1097 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 PPP4CP60510 307 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 UBAC1Q9BSL1 405 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 RTFDC1Q9BY42 306 aaPredicted RBP11□□□□□ -0.65
LINC00243-201ENST00000399196 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
LINC00243-201ENST00000399196 CCDC69A6NI79 296 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 CPLX1O14810 134 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 ECE2O60344 883 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 PCP11498 1178 aaKnown RBP11□□□□□ -0.65
LINC00243-201ENST00000399196 LIG1P18858 919 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 METAP2P50579 478 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00243-201ENST00000399196 SEC23AQ15436 765 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 AOC3Q16853 763 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 SYNE3Q6ZMZ3 975 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 TEX11Q8IYF3 940 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 PHKBQ93100 1093 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 SYT17Q9BSW7 474 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
LINC00243-201ENST00000399196 TTF2Q9UNY4 1162 aaKnown RBP11□□□□□ -0.65
LINC00243-201ENST00000399196 ELP1O95163 1332 aa11□□□□□ -0.65
LINC00243-201ENST00000399196 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 GPR75-ASB3A0A0A6YYF3 556 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 FGRP09769 529 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 PDE4BQ07343 736 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 RTKN2Q8IZC4 609 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms