RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 GTF2F1P35269 517 aaKnown RBP eCLIP15.31■□□□□ 0.04
TOP3B-202ENST00000398793 PPARAQ07869 468 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-202ENST00000398793 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 SYT1P21579 422 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ANTXR2P58335 489 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 DSCC1Q9BVC3 393 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 USP40Q9NVE5 1235 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 SYCE3A1L190 88 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 ANAPC15P60006 121 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CDAN1Q8IWY9 1227 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 RGS22Q8NE09 1264 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 ZBTB9Q96C00 473 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CRAMP1Q96RY5 1269 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CTR9Q6PD62 1173 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
TOP3B-202ENST00000398793 HOMER1Q86YM7 354 aa15.27■□□□□ 0.03
TOP3B-202ENST00000398793 CNKSR1Q969H4 720 aa15.27■□□□□ 0.03
TOP3B-202ENST00000398793 ERICH2A1L162 156 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 PTPDC1A2A3K4 754 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 EGFRP00533 1210 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 TFAP4Q01664 338 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 SLC26A6Q9BXS9 759 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GNL2Q13823 731 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 YDJCA8MPS7 323 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GDF11O95390 407 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 KRT32Q14532 448 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 LRSAM1Q6UWE0 723 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 MYH3P11055 1940 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 STX6O43752 255 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 CDC27P30260 824 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 HOXA10P31260 410 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 OGFRQ9NZT2 677 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 PSMD14O00487 310 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 TBC1D10BQ4KMP7 808 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ERICH4A6NGS2 130 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 BAG3O95817 575 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 METAP2P50579 478 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■□□□□ 9
TOP3B-202ENST00000398793 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 FHDC1Q9C0D6 1143 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ASTN2O75129 1339 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 WTAPQ15007 396 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 DALRD3Q5D0E6 543 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 CRACR2BQ8N4Y2 399 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 FEZ1Q99689 392 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 TNKSO95271 1327 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 SNAP25P60880 206 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 GABPB1Q06547 395 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 BRCA2P51587 3418 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 SLC20A2Q08357 652 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms