RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 GTF2F1P35269 517 aaKnown RBP eCLIP15.31■□□□□ 0.04
TOP3B-202ENST00000398793 PPARAQ07869 468 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-202ENST00000398793 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
TOP3B-202ENST00000398793 SYT1P21579 422 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ANTXR2P58335 489 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
TOP3B-202ENST00000398793 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 DSCC1Q9BVC3 393 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 USP40Q9NVE5 1235 aa15.3■□□□□ 0.04
TOP3B-202ENST00000398793 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 SYCE3A1L190 88 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 ANAPC15P60006 121 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CDAN1Q8IWY9 1227 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-202ENST00000398793 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
TOP3B-202ENST00000398793 RGS22Q8NE09 1264 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 ZBTB9Q96C00 473 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CRAMP1Q96RY5 1269 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CTR9Q6PD62 1173 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
TOP3B-202ENST00000398793 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
TOP3B-202ENST00000398793 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
TOP3B-202ENST00000398793 HOMER1Q86YM7 354 aa15.27■□□□□ 0.03
TOP3B-202ENST00000398793 CNKSR1Q969H4 720 aa15.27■□□□□ 0.03
TOP3B-202ENST00000398793 ERICH2A1L162 156 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 PTPDC1A2A3K4 754 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 EGFRP00533 1210 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 TFAP4Q01664 338 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 SLC26A6Q9BXS9 759 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GNL2Q13823 731 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 YDJCA8MPS7 323 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 GDF11O95390 407 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
TOP3B-202ENST00000398793 KRT32Q14532 448 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 LRSAM1Q6UWE0 723 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
TOP3B-202ENST00000398793 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 MYH3P11055 1940 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 STX6O43752 255 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 CDC27P30260 824 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 HOXA10P31260 410 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 OGFRQ9NZT2 677 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 PSMD14O00487 310 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 TBC1D10BQ4KMP7 808 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
TOP3B-202ENST00000398793 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
TOP3B-202ENST00000398793 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ERICH4A6NGS2 130 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 BAG3O95817 575 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 METAP2P50579 478 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■□□□□ 9
TOP3B-202ENST00000398793 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 FHDC1Q9C0D6 1143 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ASTN2O75129 1339 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 WTAPQ15007 396 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 DALRD3Q5D0E6 543 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 CRACR2BQ8N4Y2 399 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 FEZ1Q99689 392 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 TNKSO95271 1327 aa15.24■□□□□ 0.03
TOP3B-202ENST00000398793 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
TOP3B-202ENST00000398793 SNAP25P60880 206 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 GABPB1Q06547 395 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 BRCA2P51587 3418 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 SLC20A2Q08357 652 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms