RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 PHKG2P15735 406 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 NAIF1Q69YI7 327 aaPredicted RBP12.35□□□□□ -0.43
MSL3-207ENST00000398527 UBE2Q1Q7Z7E8 422 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 TTC14Q96N46 770 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 LSG1Q9H089 658 aaKnown RBP12.35□□□□□ -0.43
MSL3-207ENST00000398527 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
MSL3-207ENST00000398527 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
MSL3-207ENST00000398527 HIP1O00291 1037 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 RWDD2BP57060 319 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 PKP1Q13835 747 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 SYNE3Q6ZMZ3 975 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
MSL3-207ENST00000398527 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 LOC102724428A0A0B4J2F2 783 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
MSL3-207ENST00000398527 FOSL1P15407 271 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
MSL3-207ENST00000398527 SIK1P57059 783 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
MSL3-207ENST00000398527 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
MSL3-207ENST00000398527 LBX1P52954 281 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 TERF2Q15554 542 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 LONRF1Q17RB8 773 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 LRSAM1Q6UWE0 723 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 UBXN4Q92575 508 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
MSL3-207ENST00000398527 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 ITPK1Q13572 414 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 TRIM11Q96F44 468 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 BICD1Q96G01 975 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 RPS6KC1Q96S38 1066 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
MSL3-207ENST00000398527 SESN3P58005 492 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 RASSF7Q02833 373 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 AKNAD1Q5T1N1 836 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 PIGBQ92521 554 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 BHMTQ93088 406 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 SLC5A9Q2M3M2 681 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 CAVIN1Q6NZI2 390 aaKnown RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 DPH6Q7L8W6 267 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 DRAXINQ8NBI3 349 aaPredicted RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 NACA2Q9H009 215 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
MSL3-207ENST00000398527 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 SNX14Q9Y5W7 946 aa12.32□□□□□ -0.44
MSL3-207ENST00000398527 MTA2O94776 668 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 ZNF24P17028 368 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 RPS6KA3P51812 740 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 TRAPPC3LQ5T215 181 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 LMNTD2Q8IXW0 634 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 FAXDC2Q96IV6 333 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 PLEKHG4BQ96PX9 1271 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 ALDH8A1Q9H2A2 487 aaPredicted RBP12.31□□□□□ -0.44
MSL3-207ENST00000398527 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
MSL3-207ENST00000398527 POTECB2RU33 542 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 ANXA1P04083 346 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 MMEP08473 750 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
MSL3-207ENST00000398527 MCM5P33992 734 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
MSL3-207ENST00000398527 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
MSL3-207ENST00000398527 ODF2LQ9ULJ1 636 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 LIMCH1Q9UPQ0 1083 aa12.31□□□□□ -0.44
MSL3-207ENST00000398527 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 GRM8O00222 908 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 CYP27B1O15528 508 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 HIP1RO75146 1068 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms