RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 GSG1L2A8MUP6 293 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 SLC10A3P09131 477 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
MBD1-207ENST00000398488 SHROOM1Q2M3G4 852 aaPredicted RBP18.98■□□□□ 0.63
MBD1-207ENST00000398488 DCAF15Q66K64 600 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 ELP3Q9H9T3 547 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 EPB41L4AQ9HCS5 686 aaPredicted RBP18.98■□□□□ 0.63
MBD1-207ENST00000398488 SNCAIPQ9Y6H5 919 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 NAV1Q8NEY1 1877 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 JAG1P78504 1218 aa18.97■□□□□ 0.63
MBD1-207ENST00000398488 ANKRD13AQ8IZ07 590 aa18.97■□□□□ 0.63
MBD1-207ENST00000398488 MCM9Q9NXL9 1143 aa18.97■□□□□ 0.63
MBD1-207ENST00000398488 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.97■□□□□ 0.63
MBD1-207ENST00000398488 BAZ2AQ9UIF9 1905 aaKnown RBP18.97■□□□□ 0.63
MBD1-207ENST00000398488 TBC1D12O60347 775 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 ZNF589Q86UQ0 364 aaPredicted RBP18.96■□□□□ 0.63
MBD1-207ENST00000398488 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
MBD1-207ENST00000398488 HOOK2Q96ED9 719 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 SLC10A4Q96EP9 437 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 IL25Q9H293 177 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
MBD1-207ENST00000398488 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
MBD1-207ENST00000398488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
MBD1-207ENST00000398488 LRRFIP1Q32MZ4 808 aaKnown RBP18.95■□□□□ 0.62
MBD1-207ENST00000398488 SPRYD7Q5W111 196 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 CTR9Q6PD62 1173 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 CCDC84Q86UT8 332 aaPredicted RBP18.95■□□□□ 0.62
MBD1-207ENST00000398488 JMYQ8N9B5 988 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 CCDC102AQ96A19 550 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 WNK4Q96J92 1243 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
MBD1-207ENST00000398488 THSD7BQ9C0I4 1608 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 USP17L12C9JPN9 530 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 USP17L21D6R901 530 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 ECE1P42892 770 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
MBD1-207ENST00000398488 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
MBD1-207ENST00000398488 DYNLL2Q96FJ2 89 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 HELLSQ9NRZ9 838 aa18.94■□□□□ 0.62
MBD1-207ENST00000398488 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
MBD1-207ENST00000398488 GABPAQ06546 454 aa18.93■□□□□ 0.62
MBD1-207ENST00000398488 MCMDC2Q4G0Z9 681 aa18.93■□□□□ 0.62
MBD1-207ENST00000398488 CWC27Q6UX04 472 aaKnown RBP18.93■□□□□ 0.62
MBD1-207ENST00000398488 SLC44A5Q8NCS7 719 aa18.93■□□□□ 0.62
MBD1-207ENST00000398488 OPTNQ96CV9 577 aa18.93■□□□□ 0.62
MBD1-207ENST00000398488 UNCXA6NJT0 531 aa18.92■□□□□ 0.62
MBD1-207ENST00000398488 PATL2C9JE40 543 aaKnown RBP18.92■□□□□ 0.62
MBD1-207ENST00000398488 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
MBD1-207ENST00000398488 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
MBD1-207ENST00000398488 C12orf60Q5U649 245 aa18.92■□□□□ 0.62
MBD1-207ENST00000398488 IFNL3Q8IZI9 196 aa18.92■□□□□ 0.62
MBD1-207ENST00000398488 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
MBD1-207ENST00000398488 CSADQ9Y600 493 aa18.92■□□□□ 0.62
MBD1-207ENST00000398488 SPDYE5A6NIY4 337 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 SHMT1P34896 483 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 TTC6Q86TZ1 520 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 TICAM2Q86XR7 235 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 CRACR2BQ8N4Y2 399 aaPredicted RBP18.91■□□□□ 0.62
MBD1-207ENST00000398488 OTUD5Q96G74 571 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 EHD4Q9H223 541 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 SERPINB13Q9UIV8 391 aa18.91■□□□□ 0.62
MBD1-207ENST00000398488 GDF11O95390 407 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 APPP05067 770 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 CHMLP26374 656 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 NOGQ13253 232 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 DIAPH3Q9NSV4 1193 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 CTNND1O60716 968 aaKnown RBP18.9■□□□□ 0.62
MBD1-207ENST00000398488 GNAT2P19087 354 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 MAP2K2P36507 400 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 CAP2P40123 477 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
MBD1-207ENST00000398488 PTPRAP18433 802 aa18.89■□□□□ 0.61
MBD1-207ENST00000398488 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
MBD1-207ENST00000398488 GIMAP6Q6P9H5 292 aa18.89■□□□□ 0.61
MBD1-207ENST00000398488 ERO1BQ86YB8 467 aa18.89■□□□□ 0.61
MBD1-207ENST00000398488 TACC3Q9Y6A5 838 aa18.89■□□□□ 0.61
MBD1-207ENST00000398488 CCDC171Q6TFL3 1326 aa18.88■□□□□ 0.61
MBD1-207ENST00000398488 DOCK1Q14185 1865 aa18.88■□□□□ 0.61
MBD1-207ENST00000398488 MINDY4BA8MYZ0 360 aa18.88■□□□□ 0.61
MBD1-207ENST00000398488 IRF6O14896 467 aa18.88■□□□□ 0.61
MBD1-207ENST00000398488 HSPD1P10809 573 aaKnown RBP18.88■□□□□ 0.61
MBD1-207ENST00000398488 MS4A4AQ96JQ5 239 aa18.88■□□□□ 0.61
MBD1-207ENST00000398488 PHIPQ8WWQ0 1821 aa18.87■□□□□ 0.61
MBD1-207ENST00000398488 ZBTB48P10074 688 aaPredicted RBP18.87■□□□□ 0.61
MBD1-207ENST00000398488 TDO2P48775 406 aa18.87■□□□□ 0.61
MBD1-207ENST00000398488 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
MBD1-207ENST00000398488 WBP1LQ9NX94 342 aa18.87■□□□□ 0.61
MBD1-207ENST00000398488 ATAD5Q96QE3 1844 aa18.87■□□□□ 0.61
MBD1-207ENST00000398488 GUCY1A2P33402 732 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 CDK8P49336 464 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 PTPN18Q99952 460 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 TRIM34Q9BYJ4 488 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
MBD1-207ENST00000398488 ZHX2Q9Y6X8 837 aa18.86■□□□□ 0.61
MBD1-207ENST00000398488 HIP1O00291 1037 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 GH2P01242 217 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms