RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 PDE11AQ9HCR9 933 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 LZTFL1Q9NQ48 299 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 LCMT1Q9UIC8 334 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 RAD9BQ6WBX8 426 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 NAA15Q9BXJ9 866 aaKnown RBP19.79■□□□□ 0.76
EWSR1-206ENST00000397938 SERTAD1Q9UHV2 236 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 PUF60Q9UHX1 559 aaKnown RBP19.79■□□□□ 0.76
EWSR1-206ENST00000397938 STK36Q9NRP7 1315 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 ZBTB43O43298 467 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 KIF5CO60282 957 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 NOSTRINQ8IVI9 506 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 PNKPQ96T60 521 aa19.79■□□□□ 0.76
EWSR1-206ENST00000397938 FBXO2Q9UK22 296 aaPredicted RBP19.79■□□□□ 0.76
EWSR1-206ENST00000397938 POLR2DO15514 142 aaKnown RBP19.78■□□□□ 0.76
EWSR1-206ENST00000397938 PTPREP23469 700 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 PLCD1P51178 756 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 GRIN1Q05586 938 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 SRLQ86TD4 932 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 FAM217BQ9NTX9 383 aaPredicted RBP19.78■□□□□ 0.76
EWSR1-206ENST00000397938 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 TUBB2AQ13885 445 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 MCM6Q14566 821 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 TMEM87BQ96K49 555 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 TUBB2BQ9BVA1 445 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 VPS18Q9P253 973 aa19.78■□□□□ 0.76
EWSR1-206ENST00000397938 CYP27B1O15528 508 aa19.77■□□□□ 0.76
EWSR1-206ENST00000397938 ERLIN1O75477 346 aa19.77■□□□□ 0.76
EWSR1-206ENST00000397938 ERCC5P28715 1186 aaPredicted RBP19.77■□□□□ 0.76
EWSR1-206ENST00000397938 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
EWSR1-206ENST00000397938 PI16Q6UXB8 463 aa19.77■□□□□ 0.76
EWSR1-206ENST00000397938 APTXQ7Z2E3 356 aaKnown RBP19.77■□□□□ 0.76
EWSR1-206ENST00000397938 ATRNO75882 1429 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 A0A0U1RQJ8 604 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.75
EWSR1-206ENST00000397938 TOB1P50616 345 aaPredicted RBP19.77■□□□□ 0.75
EWSR1-206ENST00000397938 TUBB4BP68371 445 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 SLC9C2Q5TAH2 1124 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 ATRIPQ8WXE1 791 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 L1RE1Q9UN81 338 aa19.77■□□□□ 0.75
EWSR1-206ENST00000397938 PARP4Q9UKK3 1724 aaKnown RBP19.76■□□□□ 0.75
EWSR1-206ENST00000397938 TRIM66O15016 1216 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 TEX33O43247 280 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 SGMS1Q86VZ5 419 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 GRAMD1CQ8IYS0 662 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 IGDCC4Q8TDY8 1250 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 FBXO3Q9UK99 471 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 PKD1L3Q7Z443 1732 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 B4E1Z4 1266 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 CABP4P57796 275 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
EWSR1-206ENST00000397938 RBL2Q08999 1139 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 LEKR1Q6ZMV7 388 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 C10orf67Q8IYJ2 551 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 SPATA20Q8TB22 786 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 SLC26A6Q9BXS9 759 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.76■□□□□ 0.758e-7■□□□□ 10.7
EWSR1-206ENST00000397938 LY9Q9HBG7 655 aa19.76■□□□□ 0.75
EWSR1-206ENST00000397938 RRP15Q9Y3B9 282 aaKnown RBP19.76■□□□□ 0.75
EWSR1-206ENST00000397938 ACTN4O43707 911 aaKnown RBP19.75■□□□□ 0.75
EWSR1-206ENST00000397938 ADD2P35612 726 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 PBX1P40424 430 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 CCDC57Q2TAC2 916 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 RASGRP2Q7LDG7 609 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 PPFIBP1Q86W92 1011 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 IGSF22Q8N9C0 903 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 ABCB6Q9NP58 842 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 BTBD18B2RXH4 712 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 IVLP07476 585 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 SSRP1Q08945 709 aaKnown RBP19.75■□□□□ 0.75
EWSR1-206ENST00000397938 ZNF569Q5MCW4 686 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 KANK3Q6NY19 840 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 NFXL1Q6ZNB6 911 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 ZNF579Q8NAF0 562 aaKnown RBP19.75■□□□□ 0.75
EWSR1-206ENST00000397938 MYL10Q9BUA6 226 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 SEC31BQ9NQW1 1179 aa19.75■□□□□ 0.75
EWSR1-206ENST00000397938 RPS6KA5O75582 802 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 FMNL1O95466 1100 aaPredicted RBP19.74■□□□□ 0.75
EWSR1-206ENST00000397938 MMP1P03956 469 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 ZBTB3Q9H5J0 574 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 AKAP11Q9UKA4 1901 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 MYO5AQ9Y4I1 1855 aaKnown RBP19.74■□□□□ 0.75
EWSR1-206ENST00000397938 CTAGE9A4FU28 777 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 KIF4BQ2VIQ3 1234 aa19.74■□□□□ 0.75
EWSR1-206ENST00000397938 PLEKHG2Q9H7P9 1386 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 MFAP3LO75121 409 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 SAFBQ15424 915 aaKnown RBP eCLIP19.73■□□□□ 0.75
EWSR1-206ENST00000397938 RILPL1Q5EBL4 403 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 DIS3L2Q8IYB7 885 aaKnown RBP19.73■□□□□ 0.75
EWSR1-206ENST00000397938 WASF1Q92558 559 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 RSPH14Q9UHP6 348 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
EWSR1-206ENST00000397938 TMEM67Q5HYA8 995 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 CT47A1Q5JQC4 288 aaPredicted RBP19.73■□□□□ 0.75
EWSR1-206ENST00000397938 SPATA1Q5VX52 437 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 SUGCTQ9HAC7 445 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 ADD3Q9UEY8 706 aaKnown RBP19.73■□□□□ 0.75
EWSR1-206ENST00000397938 FAN1Q9Y2M0 1017 aa19.73■□□□□ 0.75
EWSR1-206ENST00000397938 KRT28Q7Z3Y7 464 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms