RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OSBP2Q969R2 916 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 PSD3Q9NYI0 1048 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 STARD3NLO95772 234 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CALM1P0DP23 149 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CALM2P0DP24 149 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CALM3P0DP25 149 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 FANCCQ00597 558 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 MUM1L1Q5H9M0 696 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 UBXN6Q9BZV1 441 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 XPO4Q9C0E2 1151 aaKnown RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 BRMS1Q9HCU9 246 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 TAF6LQ9Y6J9 622 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 PFKFB1P16118 471 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 EPS15P42566 896 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 ZBTB38Q8NAP3 1195 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 A6NNZ2 444 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 PDE8BO95263 885 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 TUBB8Q3ZCM7 444 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 PARP10Q53GL7 1025 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 SPECC1LQ69YQ0 1117 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 ZCRB1Q8TBF4 217 aaKnown RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 EIF5P55010 431 aaKnown RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 NTRK3Q16288 839 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 ZSCAN26Q16670 478 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 DNAJC21Q5F1R6 531 aaKnown RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 NOSTRINQ8IVI9 506 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 EBAG9O00559 213 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 ZRANB2O95218 330 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 SSBP05455 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-205ENST00000397611 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 PANX2Q96RD6 677 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 TANGO6Q9C0B7 1094 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC113Q9H0I3 377 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 HPS5Q9UPZ3 1129 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 MEGF6O75095 1541 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 DEXIO95424 95 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MAP3K12Q12852 859 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ILDR1Q86SU0 546 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 GPAA1O43292 621 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 SLFN14P0C7P3 912 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 APOBRQ0VD83 1088 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 LPIN2Q92539 896 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 PCDHA5Q9Y5H7 936 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ZNF142P52746 1687 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 SH2B2O14492 632 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ARID4AP29374 1257 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MAP2K2P36507 400 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ANTXR2P58335 489 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 NAA25Q14CX7 972 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 DPCR1Q3MIW9 517 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MAGEF1Q9HAY2 307 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MROH5Q6ZUA9 1318 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 IL6STP40189 918 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MAP2K1Q02750 393 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ORC2Q13416 577 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 MSL1Q68DK7 614 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 TTLL11Q8NHH1 800 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 STRBPQ96SI9 672 aaKnown RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 CLGNO14967 610 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 DTNBO60941 627 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ADD2P35612 726 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 UBASH3AP57075 661 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 CCT2P78371 535 aaKnown RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 PPM1EQ8WY54 764 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 CARD6Q9BX69 1037 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 TTF2Q9UNY4 1162 aaKnown RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 SOS2Q07890 1332 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 IL2RBP14784 551 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 SARNPP82979 210 aaKnown RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 TBX2Q13207 712 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-205ENST00000397611 RESP18Q5W5W9 173 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 TMTC1Q8IUR5 882 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 TAF4BQ92750 862 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 EXOC4Q96A65 974 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ALG1Q9BT22 464 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 ITIH6Q6UXX5 1313 aa6.17□□□□□ -1.42
PTPRD-205ENST00000397611 SARSP49591 514 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ITIH3Q06033 890 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 DHX40Q8IX18 779 aaKnown RBP6.16□□□□□ -1.42
PTPRD-205ENST00000397611 EHBP1Q8NDI1 1231 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 MAP3K14Q99558 947 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 LZTFL1Q9NQ48 299 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 MTMR7Q9Y216 660 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 HSF2BPO75031 334 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 PDE6AP16499 860 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ZNF662Q6ZS27 426 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 HDXQ7Z353 690 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 ATRIPQ8WXE1 791 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 IFNKQ9P0W0 207 aa6.16□□□□□ -1.42
PTPRD-205ENST00000397611 TIMM10P62072 90 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms