RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 EPS15P42566 896 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 SPDYE2Q495Y8 402 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 Q6ZUG5 572 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 CYB5R4Q7L1T6 521 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 DDX60LQ5H9U9 1706 aaKnown RBP25.04■■□□□ 1.6
CPNE1-204ENST00000397443 PRC1O43663 620 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 KIF4BQ2VIQ3 1234 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 CNNM2Q9H8M5 875 aa25.04■■□□□ 1.6
CPNE1-204ENST00000397443 K7ELQ4 463 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-204ENST00000397443 RANBP6O60518 1105 aaKnown RBP25.03■■□□□ 1.6
CPNE1-204ENST00000397443 MCM5P33992 734 aa25.03■■□□□ 1.6
CPNE1-204ENST00000397443 ANTXR2P58335 489 aa25.03■■□□□ 1.6
CPNE1-204ENST00000397443 ZBED3Q96IU2 234 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-204ENST00000397443 KRT23Q9C075 422 aa25.03■■□□□ 1.6
CPNE1-204ENST00000397443 ASTN2O75129 1339 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-204ENST00000397443 EXOSC10Q01780 885 aaKnown RBP25.02■■□□□ 1.6
CPNE1-204ENST00000397443 PDE4BQ07343 736 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 TRPM4Q8TD43 1214 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 GPHNQ9NQX3 736 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-204ENST00000397443 DDTLA6NHG4 134 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-204ENST00000397443 SLURP2P0DP57 97 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 DPY19L2Q6NUT2 758 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 TTC6Q86TZ1 520 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 ZKSCAN3Q9BRR0 538 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 ZSWIM5Q9P217 1185 aa25.02■■□□□ 1.6
CPNE1-204ENST00000397443 TOB2Q14106 344 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-204ENST00000397443 MKNK2Q9HBH9 465 aa25.01■■□□□ 1.59
CPNE1-204ENST00000397443 LMOD1P29536 600 aaPredicted RBP25■■□□□ 1.59
CPNE1-204ENST00000397443 SH3BP5LQ7L8J4 393 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 ESR2Q92731 530 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 BRF1Q92994 677 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 FOXD4L1Q9NU39 408 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25■■□□□ 1.59
CPNE1-204ENST00000397443 HLA-DOAP06340 250 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 MMP14P50281 582 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 FAM47AQ5JRC9 791 aa25■■□□□ 1.59
CPNE1-204ENST00000397443 ROBO3Q96MS0 1386 aa24.99■■□□□ 1.59
CPNE1-204ENST00000397443 ENTPD3O75355 529 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 CDK8P49336 464 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 MCM2P49736 904 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 TMX3Q96JJ7 454 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 NAP1L2Q9ULW6 460 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-204ENST00000397443 FAM196BA6NMK8 535 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 FGRP09769 529 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 C16orf86Q6ZW13 317 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 TMEM39BQ9GZU3 492 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 HACL1Q9UJ83 578 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 LIMCH1Q9UPQ0 1083 aa24.98■■□□□ 1.59
CPNE1-204ENST00000397443 CNTNAP1P78357 1384 aa24.97■■□□□ 1.59
CPNE1-204ENST00000397443 ORC4O43929 436 aa24.97■■□□□ 1.59
CPNE1-204ENST00000397443 HSP90AA1P07900 732 aaKnown RBP24.97■■□□□ 1.59
CPNE1-204ENST00000397443 ANKRD1Q15327 319 aa24.97■■□□□ 1.59
CPNE1-204ENST00000397443 DHX36Q9H2U1 1008 aaKnown RBP24.97■■□□□ 1.59
CPNE1-204ENST00000397443 SERPINB13Q9UIV8 391 aa24.97■■□□□ 1.59
CPNE1-204ENST00000397443 TPCN1Q9ULQ1 816 aa24.97■■□□□ 1.59
CPNE1-204ENST00000397443 NPM3O75607 178 aaKnown RBP24.96■■□□□ 1.59
CPNE1-204ENST00000397443 LARGE1O95461 756 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 PCP11498 1178 aaKnown RBP24.96■■□□□ 1.59
CPNE1-204ENST00000397443 APOBRQ0VD83 1088 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 CRACR2BQ8N4Y2 399 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-204ENST00000397443 CSRNP1Q96S65 589 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 TSPY2A6NKD2 308 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 IFIT3O14879 490 aaKnown RBP24.96■■□□□ 1.59
CPNE1-204ENST00000397443 STK3Q13188 491 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 TMEM67Q5HYA8 995 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 CDAN1Q8IWY9 1227 aa24.96■■□□□ 1.59
CPNE1-204ENST00000397443 HIRAP54198 1017 aaPredicted RBP24.95■■□□□ 1.58
CPNE1-204ENST00000397443 ZNF444Q8N0Y2 327 aaPredicted RBP24.95■■□□□ 1.58
CPNE1-204ENST00000397443 FAM151AQ8WW52 585 aa24.95■■□□□ 1.58
CPNE1-204ENST00000397443 UBAC1Q9BSL1 405 aa24.95■■□□□ 1.58
CPNE1-204ENST00000397443 TRIM34Q9BYJ4 488 aa24.95■■□□□ 1.58
CPNE1-204ENST00000397443 PI4KBQ9UBF8 816 aa24.95■■□□□ 1.58
CPNE1-204ENST00000397443 NMT2O60551 498 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 TFAP4Q01664 338 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 ANGEL2Q5VTE6 544 aaKnown RBP24.94■■□□□ 1.58
CPNE1-204ENST00000397443 ALDH8A1Q9H2A2 487 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-204ENST00000397443 ZNF287Q9HBT7 754 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 SENP2Q9HC62 589 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 GLTPD2A6NH11 291 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 RASA1P20936 1047 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 GABPAQ06546 454 aa24.94■■□□□ 1.58
CPNE1-204ENST00000397443 SH2B2O14492 632 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-204ENST00000397443 TSPY3P0CV98 308 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 TSPY8P0CW00 308 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 RASA3Q14644 834 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 ME3Q16798 604 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 FKBP1CQ5VVH2 108 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 RAB11FIP4Q86YS3 637 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 IL27Q8NEV9 243 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 GGA3Q9NZ52 723 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 WDR19Q8NEZ3 1342 aa24.93■■□□□ 1.58
CPNE1-204ENST00000397443 ERICH2A1L162 156 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 TNNI2P48788 182 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 SART3Q15020 963 aaKnown RBP24.92■■□□□ 1.58
CPNE1-204ENST00000397443 NECAB1Q8N987 351 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 IGDCC4Q8TDY8 1250 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 TMEM87BQ96K49 555 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 ADARB2Q9NS39 739 aaKnown RBP24.92■■□□□ 1.58
CPNE1-204ENST00000397443 ANGEL1Q9UNK9 670 aaKnown RBP24.92■■□□□ 1.58
CPNE1-204ENST00000397443 SIPA1L1O43166 1804 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms