RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RAD50Q92878 1312 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 TLR2O60603 784 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 C22orf23Q9BZE7 217 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 ZCCHC17Q9NP64 241 aaKnown RBP15.86■□□□□ 0.13
SEC13-209ENST00000397117 ABCF2Q9UG63 623 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 BRCA2P51587 3418 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 A0A0D9SFI3 127 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 CETPP11597 493 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 CACNB3P54284 484 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 MCMDC2Q4G0Z9 681 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 FKBP1CQ5VVH2 108 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 ERO1BQ86YB8 467 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 TBC1D22AQ8WUA7 517 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 ARHGAP39Q9C0H5 1083 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 HELLSQ9NRZ9 838 aa15.86■□□□□ 0.13
SEC13-209ENST00000397117 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 BTBD19C9JJ37 291 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 ZMYM1Q5SVZ6 1142 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 FAM83AQ86UY5 434 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 ZGPATQ8N5A5 531 aaKnown RBP15.85■□□□□ 0.13
SEC13-209ENST00000397117 WDR66Q8TBY9 1149 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 TEKT1Q969V4 418 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 ZDHHC15Q96MV8 337 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 RAI14Q9P0K7 980 aa15.85■□□□□ 0.13
SEC13-209ENST00000397117 IRF6O14896 467 aa15.84■□□□□ 0.13
SEC13-209ENST00000397117 LACTBP83111 547 aaPredicted RBP15.84■□□□□ 0.13
SEC13-209ENST00000397117 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
SEC13-209ENST00000397117 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
SEC13-209ENST00000397117 ZKSCAN4Q969J2 545 aaPredicted RBP15.84■□□□□ 0.13
SEC13-209ENST00000397117 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
SEC13-209ENST00000397117 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
SEC13-209ENST00000397117 IL25Q9H293 177 aa15.84■□□□□ 0.13
SEC13-209ENST00000397117 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
SEC13-209ENST00000397117 WDHD1O75717 1129 aaPredicted RBP15.83■□□□□ 0.13
SEC13-209ENST00000397117 GNRH1P01148 92 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 CHGBP05060 677 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 PDE6AP16499 860 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 ADD2P35612 726 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 PPIL2Q13356 520 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 SNAPC2Q13487 334 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 UBE3CQ15386 1083 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 SPTY2D1Q68D10 685 aaPredicted RBP15.83■□□□□ 0.13
SEC13-209ENST00000397117 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 MAGEB6Q8N7X4 407 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 SH3TC2Q8TF17 1288 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 APPBP2Q92624 585 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 WRNIP1Q96S55 665 aa15.83■□□□□ 0.13
SEC13-209ENST00000397117 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
SEC13-209ENST00000397117 MCCP23508 829 aa15.83■□□□□ 0.12
SEC13-209ENST00000397117 KIF22Q14807 665 aa15.83■□□□□ 0.12
SEC13-209ENST00000397117 HOOK2Q96ED9 719 aa15.83■□□□□ 0.12
SEC13-209ENST00000397117 SUGT1Q9Y2Z0 365 aa15.83■□□□□ 0.12
SEC13-209ENST00000397117 ZNF532Q9HCE3 1301 aa15.83■□□□□ 0.12
SEC13-209ENST00000397117 PRMT2P55345 433 aa15.82■□□□□ 0.12
SEC13-209ENST00000397117 SLFNL1Q499Z3 407 aa15.82■□□□□ 0.12
SEC13-209ENST00000397117 C17orf99Q6UX52 265 aa15.82■□□□□ 0.12
SEC13-209ENST00000397117 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
SEC13-209ENST00000397117 CCDC171Q6TFL3 1326 aa15.82■□□□□ 0.12
SEC13-209ENST00000397117 SALL1Q9NSC2 1324 aa15.82■□□□□ 0.12
SEC13-209ENST00000397117 H0YGN5 161 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 MYCP01106 439 aaPredicted RBP15.81■□□□□ 0.12
SEC13-209ENST00000397117 CTGFP29279 349 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
SEC13-209ENST00000397117 PPATQ06203 517 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 HHIPL2Q6UWX4 724 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 ZNF589Q86UQ0 364 aaPredicted RBP15.81■□□□□ 0.12
SEC13-209ENST00000397117 OSBP2Q969R2 916 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 LSG1Q9H089 658 aaKnown RBP15.81■□□□□ 0.12
SEC13-209ENST00000397117 TMOD2Q9NZR1 351 aa15.81■□□□□ 0.12
SEC13-209ENST00000397117 MYH13Q9UKX3 1938 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 RPAP1Q9BWH6 1393 aaPredicted RBP15.8■□□□□ 0.12
SEC13-209ENST00000397117 MAST3O60307 1309 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 M0R2C6 588 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 IGSF3O75054 1194 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 LDHBP07195 334 aaKnown RBP15.8■□□□□ 0.12
SEC13-209ENST00000397117 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
SEC13-209ENST00000397117 DCAF15Q66K64 600 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 CCDC129Q6ZRS4 1044 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 ZNF341Q9BYN7 854 aa15.8■□□□□ 0.12
SEC13-209ENST00000397117 TCRBV5S4A2TA0A5A2 114 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 CYP7A1P22680 504 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 INPP5BP32019 993 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 NAA16Q6N069 864 aaPredicted RBP15.79■□□□□ 0.12
SEC13-209ENST00000397117 TMED8Q6PL24 325 aaPredicted RBP15.79■□□□□ 0.12
SEC13-209ENST00000397117 ANKRD23Q86SG2 305 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 DZIP1Q86YF9 867 aaKnown RBP15.79■□□□□ 0.12
SEC13-209ENST00000397117 PUS7LQ9H0K6 701 aaKnown RBP15.79■□□□□ 0.12
SEC13-209ENST00000397117 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 ADGRA2Q96PE1 1338 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 PRDX5P30044 214 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 PTH1RQ03431 593 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 MOGSQ13724 837 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 MTFR1Q15390 333 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 MIGA2Q7L4E1 593 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 FAM151AQ8WW52 585 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 SRRDQ9UH36 339 aa15.79■□□□□ 0.12
SEC13-209ENST00000397117 KCNH4Q9UQ05 1017 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms