RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 AK9Q5TCS8 1911 aa16.82■□□□□ 0.28
SEC13-205ENST00000397101 MYH13Q9UKX3 1938 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 TBC1D12O60347 775 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 CIAO1O76071 339 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 ATG9AQ7Z3C6 839 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
SEC13-205ENST00000397101 MEIS3Q99687 375 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
SEC13-205ENST00000397101 PDS5AQ29RF7 1337 aaKnown RBP16.8■□□□□ 0.28
SEC13-205ENST00000397101 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SEC13-205ENST00000397101 HMGCRP04035 888 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
SEC13-205ENST00000397101 SH3BP5LQ7L8J4 393 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 PTPRFP10586 1907 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
SEC13-205ENST00000397101 RPTORQ8N122 1335 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 GNAI2P04899 355 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 AAMPQ13685 434 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 ATP2B3Q16720 1220 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 ANKRD13CQ8N6S4 541 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
SEC13-205ENST00000397101 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
SEC13-205ENST00000397101 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
SEC13-205ENST00000397101 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
SEC13-205ENST00000397101 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
SEC13-205ENST00000397101 HMX1Q9NP08 348 aaPredicted RBP16.78■□□□□ 0.28
SEC13-205ENST00000397101 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
SEC13-205ENST00000397101 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
SEC13-205ENST00000397101 OGDHLQ9ULD0 1010 aa16.78■□□□□ 0.28
SEC13-205ENST00000397101 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.28
SEC13-205ENST00000397101 ALPK3Q96L96 1907 aa16.77■□□□□ 0.28
SEC13-205ENST00000397101 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
SEC13-205ENST00000397101 PABPC4Q13310 644 aaKnown RBP eCLIP16.77■□□□□ 0.28
SEC13-205ENST00000397101 TDHQ8IZJ6 230 aa16.77■□□□□ 0.28
SEC13-205ENST00000397101 DEFB123Q8N688 67 aa16.77■□□□□ 0.28
SEC13-205ENST00000397101 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
SEC13-205ENST00000397101 ZBTB40Q9NUA8 1239 aa16.77■□□□□ 0.28
SEC13-205ENST00000397101 DOCK1Q14185 1865 aa16.77■□□□□ 0.27
SEC13-205ENST00000397101 VCANP13611 3396 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 DOCK3Q8IZD9 2030 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 LAMA2P24043 3122 aaKnown RBP16.76■□□□□ 0.27
SEC13-205ENST00000397101 PHKA1P46020 1223 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
SEC13-205ENST00000397101 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 CUL9Q8IWT3 2517 aa16.76■□□□□ 0.27
SEC13-205ENST00000397101 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
SEC13-205ENST00000397101 IL15P40933 162 aaPredicted RBP16.75■□□□□ 0.27
SEC13-205ENST00000397101 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 MAP3K21Q5TCX8 1036 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 SPTY2D1Q68D10 685 aaPredicted RBP16.75■□□□□ 0.27
SEC13-205ENST00000397101 DZIP1Q86YF9 867 aaKnown RBP16.75■□□□□ 0.27
SEC13-205ENST00000397101 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 C11orf49Q9H6J7 331 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 MTMR10Q9NXD2 777 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
SEC13-205ENST00000397101 GPR75-ASB3A0A0A6YYF3 556 aa16.74■□□□□ 0.27
SEC13-205ENST00000397101 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
SEC13-205ENST00000397101 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
SEC13-205ENST00000397101 MORF4L1Q9UBU8 362 aa16.74■□□□□ 0.27
SEC13-205ENST00000397101 ZMYND8Q9ULU4 1186 aaPredicted RBP16.74■□□□□ 0.27
SEC13-205ENST00000397101 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
SEC13-205ENST00000397101 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
SEC13-205ENST00000397101 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
SEC13-205ENST00000397101 BTDP43251 543 aa16.73■□□□□ 0.27
SEC13-205ENST00000397101 RHBDL3P58872 404 aa16.73■□□□□ 0.27
SEC13-205ENST00000397101 SPP2Q13103 211 aa16.73■□□□□ 0.27
SEC13-205ENST00000397101 LOC285556D6RIA3 1793 aa16.72■□□□□ 0.27
SEC13-205ENST00000397101 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
SEC13-205ENST00000397101 SOCS4Q8WXH5 440 aa16.72■□□□□ 0.27
SEC13-205ENST00000397101 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
SEC13-205ENST00000397101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.72■□□□□ 0.27
SEC13-205ENST00000397101 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
SEC13-205ENST00000397101 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 COL6A1P12109 1028 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 CAP2P40123 477 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 PICALMQ13492 652 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 RASGRF1Q13972 1273 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 FAM109BQ6ICB4 259 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 TRIB2Q92519 343 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 SIL1Q9H173 461 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 AS3MTQ9HBK9 375 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
SEC13-205ENST00000397101 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
SEC13-205ENST00000397101 DNAH12Q6ZR08 3092 aa16.71■□□□□ 0.26
SEC13-205ENST00000397101 PFASO15067 1338 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 HMMRO75330 724 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms