RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
SEC13-204ENST00000397099 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
SEC13-204ENST00000397099 EFCC1Q9HA90 598 aa16.91■□□□□ 0.3
SEC13-204ENST00000397099 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
SEC13-204ENST00000397099 FLT1P17948 1338 aa16.91■□□□□ 0.3
SEC13-204ENST00000397099 PTPRAP18433 802 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 SLC9C2Q5TAH2 1124 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 METTL16Q86W50 562 aaKnown RBP16.9■□□□□ 0.3
SEC13-204ENST00000397099 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
SEC13-204ENST00000397099 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 MYH1P12882 1939 aa16.9■□□□□ 0.3
SEC13-204ENST00000397099 BTBD19C9JJ37 291 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 GOLIM4O00461 696 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 USP5P45974 858 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
SEC13-204ENST00000397099 HAUS7Q99871 368 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 SLC45A1Q9Y2W3 748 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
SEC13-204ENST00000397099 MYH7P12883 1935 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 MAGEB6P1A0A0J9YX57 407 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 TLR2O60603 784 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 ASNSP08243 561 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 PDE6AP16499 860 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 CAP2P40123 477 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 CRNKL1Q9BZJ0 848 aaKnown RBP16.88■□□□□ 0.29
SEC13-204ENST00000397099 AS3MTQ9HBK9 375 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 ECHDC1Q9NTX5 307 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
SEC13-204ENST00000397099 PHIPQ8WWQ0 1821 aa16.87■□□□□ 0.29
SEC13-204ENST00000397099 A0A0G2JLL6 359 aaPredicted RBP16.87■□□□□ 0.29
SEC13-204ENST00000397099 GNRH1P01148 92 aa16.87■□□□□ 0.29
SEC13-204ENST00000397099 KIF22Q14807 665 aa16.87■□□□□ 0.29
SEC13-204ENST00000397099 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
SEC13-204ENST00000397099 PRRT2Q7Z6L0 340 aaPredicted RBP16.87■□□□□ 0.29
SEC13-204ENST00000397099 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
SEC13-204ENST00000397099 NDUFB9Q9Y6M9 179 aa16.87■□□□□ 0.29
SEC13-204ENST00000397099 HTTP42858 3142 aa16.87■□□□□ 0.29
SEC13-204ENST00000397099 PTPRFP10586 1907 aa16.86■□□□□ 0.29
SEC13-204ENST00000397099 USP17L5A8MUK1 530 aa16.86■□□□□ 0.29
SEC13-204ENST00000397099 DYNLL1P63167 89 aaKnown RBP16.86■□□□□ 0.29
SEC13-204ENST00000397099 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
SEC13-204ENST00000397099 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
SEC13-204ENST00000397099 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
SEC13-204ENST00000397099 EHD4Q9H223 541 aa16.86■□□□□ 0.29
SEC13-204ENST00000397099 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
SEC13-204ENST00000397099 TNRC18O15417 2968 aaPredicted RBP16.86■□□□□ 0.29
SEC13-204ENST00000397099 PDHXO00330 501 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC13-204ENST00000397099 UBE3CQ15386 1083 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 PROCA1Q8NCQ7 364 aaPredicted RBP16.85■□□□□ 0.29
SEC13-204ENST00000397099 ZNF280CQ8ND82 737 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 ZNF532Q9HCE3 1301 aa16.85■□□□□ 0.29
SEC13-204ENST00000397099 SIPA1L1O43166 1804 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 TCRBV5S4A2TA0A5A2 114 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 ERC2O15083 957 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
SEC13-204ENST00000397099 PRMT2P55345 433 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 CAP1Q01518 475 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 PNMA3Q9UL41 463 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 PALD1Q9ULE6 856 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 CENPFP49454 3210 aa16.84■□□□□ 0.29
SEC13-204ENST00000397099 ADD2P35612 726 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
SEC13-204ENST00000397099 MOGSQ13724 837 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 WDR18Q9BV38 432 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
SEC13-204ENST00000397099 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
SEC13-204ENST00000397099 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
SEC13-204ENST00000397099 SLURP2P0DP57 97 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
SEC13-204ENST00000397099 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 GPAT2Q6NUI2 795 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 C17orf99Q6UX52 265 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 AMOTL1Q8IY63 956 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 CRBNQ96SW2 442 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
SEC13-204ENST00000397099 AGTPBP1Q9UPW5 1226 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 PTCH2Q9Y6C5 1203 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
SEC13-204ENST00000397099 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 C19orf81C9J6K1 198 aa16.81■□□□□ 0.28
SEC13-204ENST00000397099 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms