RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 MRC1P22897 1456 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 SALL1Q9NSC2 1324 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 FGAP02671 866 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 HSP90B2PQ58FF3 399 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 GOLGA5Q8TBA6 731 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 PNKPQ96T60 521 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 CASZ1Q86V15 1759 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 TEX33O43247 280 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 KRT40Q6A162 431 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 PI16Q6UXB8 463 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 BMP6P22004 513 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 CASP1P29466 404 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 KCNJ6P48051 423 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 RFX5P48382 616 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 GRIN1Q05586 938 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 SRLQ86TD4 932 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 PPFIBP1Q86W92 1011 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 TMEM139Q8IV31 216 aa11.24□□□□□ -0.61
TRIM39-203ENST00000396547 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
TRIM39-203ENST00000396547 KIF5CO60282 957 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 IL2RBP14784 551 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 AFMP43652 599 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 AKAP17AQ02040 695 aaKnown RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 TRIM29Q14134 588 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 ZNF213O14771 459 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 ABL1P00519 1130 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 CCDC175P0C221 793 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 TRDNQ13061 729 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 DHX8Q14562 1220 aaKnown RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
TRIM39-203ENST00000396547 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 DRC1Q96MC2 740 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 SERTAD1Q9UHV2 236 aa11.23□□□□□ -0.61
TRIM39-203ENST00000396547 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM39-203ENST00000396547 HDXQ7Z353 690 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 A0A1B0GUL7 405 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
TRIM39-203ENST00000396547 STX10O60499 249 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 CUTAO60888 179 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 SLC20A2Q08357 652 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 SMYD4Q8IYR2 804 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-203ENST00000396547 GOLGA6L1Q8N7Z2 621 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 STAMQ92783 540 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 SLC26A6Q9BXS9 759 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 CCDC151A5D8V7 595 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 ZMYND10O75800 440 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 ADORA1P30542 326 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 RBL2Q08999 1139 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 TTC39AQ5SRH9 613 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 TUBE1Q9UJT0 475 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
TRIM39-203ENST00000396547 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 AKR1B15C9JRZ8 316 aaPredicted RBP11.21□□□□□ -0.61
TRIM39-203ENST00000396547 VSNL1P62760 191 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 AMOTQ4VCS5 1084 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 IGSF22Q8N9C0 903 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.61
TRIM39-203ENST00000396547 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
TRIM39-203ENST00000396547 HOOK1Q9UJC3 728 aaKnown RBP11.21□□□□□ -0.61
TRIM39-203ENST00000396547 C5P01031 1676 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms