RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 STK38Q15208 465 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 SEC23AQ15436 765 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
CBX3-202ENST00000396386 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
CBX3-202ENST00000396386 UFL1O94874 794 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
CBX3-202ENST00000396386 GSTO1P78417 241 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 TYRO3Q06418 890 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 USP17L12C9JPN9 530 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 USP17L21D6R901 530 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 ORC4O43929 436 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 GNL2Q13823 731 aaKnown RBP17.36■□□□□ 0.37
CBX3-202ENST00000396386 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 LINC00301Q8NCQ3 95 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
CBX3-202ENST00000396386 GGA1Q9UJY5 639 aa17.36■□□□□ 0.37
CBX3-202ENST00000396386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.36■□□□□ 0.37
CBX3-202ENST00000396386 DDX60LQ5H9U9 1706 aaKnown RBP17.36■□□□□ 0.37
CBX3-202ENST00000396386 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 BBOX1O75936 387 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 SBK1Q52WX2 424 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 CKAP2LQ8IYA6 745 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 GOLPH3LQ9H4A5 285 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 CLIC4Q9Y696 253 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 CTAGE5O15320 804 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 FAM160A1Q05DH4 1040 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 PPP2R5BQ15173 497 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 ENAHQ8N8S7 591 aaPredicted RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 NUP133Q8WUM0 1156 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 GPR101Q96P66 508 aaPredicted RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
CBX3-202ENST00000396386 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
CBX3-202ENST00000396386 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
CBX3-202ENST00000396386 DEXIO95424 95 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
CBX3-202ENST00000396386 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 ADALQ6DHV7 355 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 FAM200AQ8TCP9 573 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
CBX3-202ENST00000396386 SPTLC2O15270 562 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 PRDM1O75626 825 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 ZSCAN30Q86W11 494 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 PROM2Q8N271 834 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 NOL10Q9BSC4 688 aaKnown RBP17.33■□□□□ 0.37
CBX3-202ENST00000396386 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 USP25Q9UHP3 1055 aa17.33■□□□□ 0.37
CBX3-202ENST00000396386 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
CBX3-202ENST00000396386 CLCN1P35523 988 aa17.33■□□□□ 0.36
CBX3-202ENST00000396386 CATIPQ7Z7H3 387 aa17.33■□□□□ 0.36
CBX3-202ENST00000396386 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
CBX3-202ENST00000396386 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.36
CBX3-202ENST00000396386 CD209Q9NNX6 404 aa17.33■□□□□ 0.36
CBX3-202ENST00000396386 ROBO3Q96MS0 1386 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 FOCADQ5VW36 1801 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 DDAH1O94760 285 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 BAG3O95817 575 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 LDHCP07864 332 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 CALM1P0DP23 149 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 CALM2P0DP24 149 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 CALM3P0DP25 149 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 IL1R1P14778 569 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBX3-202ENST00000396386 PDE4BQ07343 736 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 SAFBQ15424 915 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBX3-202ENST00000396386 CERS3Q8IU89 383 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 ENGASEQ8NFI3 743 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
CBX3-202ENST00000396386 MMP1P03956 469 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 CYP2D6P10635 497 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 USP5P45974 858 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 NT5C2P49902 561 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 SNW1Q13573 536 aaKnown RBP17.31■□□□□ 0.36
CBX3-202ENST00000396386 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CBX3-202ENST00000396386 RBM28Q9NW13 759 aaKnown RBP17.31■□□□□ 0.36
CBX3-202ENST00000396386 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 QSER1Q2KHR3 1735 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
CBX3-202ENST00000396386 GUCY1A2P33402 732 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
CBX3-202ENST00000396386 AMOTL1Q8IY63 956 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms