RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CTGFP29279 349 aa22.36■■□□□ 1.17
FXN-203ENST00000396366 LACTBP83111 547 aaPredicted RBP22.36■■□□□ 1.17
FXN-203ENST00000396366 PRRT2Q7Z6L0 340 aaPredicted RBP22.36■■□□□ 1.17
FXN-203ENST00000396366 COL2A1P02458 1487 aaPredicted RBP22.35■■□□□ 1.17
FXN-203ENST00000396366 ADGRA2Q96PE1 1338 aa22.35■■□□□ 1.17
FXN-203ENST00000396366 TRIM75PA6NK02 468 aa22.35■■□□□ 1.17
FXN-203ENST00000396366 HSP90AB4PQ58FF6 505 aa22.35■■□□□ 1.17
FXN-203ENST00000396366 MIGA1Q8NAN2 632 aa22.35■■□□□ 1.17
FXN-203ENST00000396366 SIPA1L1O43166 1804 aa22.35■■□□□ 1.17
FXN-203ENST00000396366 GADL1Q6ZQY3 521 aa22.34■■□□□ 1.17
FXN-203ENST00000396366 MAGEB6Q8N7X4 407 aa22.34■■□□□ 1.17
FXN-203ENST00000396366 PALD1Q9ULE6 856 aa22.34■■□□□ 1.17
FXN-203ENST00000396366 PTCH2Q9Y6C5 1203 aa22.34■■□□□ 1.17
FXN-203ENST00000396366 FLT1P17948 1338 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 PTPRFP10586 1907 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 PLCG2P16885 1265 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 JAG1P78504 1218 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 SLC4A8Q2Y0W8 1093 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 PI4KBQ9UBF8 816 aa22.33■■□□□ 1.17
FXN-203ENST00000396366 SAP30BPQ9UHR5 308 aaKnown RBP22.33■■□□□ 1.17
FXN-203ENST00000396366 FOCADQ5VW36 1801 aa22.33■■□□□ 1.16
FXN-203ENST00000396366 ATAD5Q96QE3 1844 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 POTEFA5A3E0 1075 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 HMMRO75330 724 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 CAP2P40123 477 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 KIF22Q14807 665 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 ARHGEF6Q15052 776 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 FASTKD5Q7L8L6 764 aaKnown RBP22.32■■□□□ 1.16
FXN-203ENST00000396366 CLASRPQ8N2M8 674 aaKnown RBP22.32■■□□□ 1.16
FXN-203ENST00000396366 KIF1BPQ96EK5 621 aa22.32■■□□□ 1.16
FXN-203ENST00000396366 SPP2Q13103 211 aa22.31■■□□□ 1.16
FXN-203ENST00000396366 SHROOM1Q2M3G4 852 aaPredicted RBP22.31■■□□□ 1.16
FXN-203ENST00000396366 ARMC5Q96C12 935 aa22.31■■□□□ 1.16
FXN-203ENST00000396366 DHX36Q9H2U1 1008 aaKnown RBP22.31■■□□□ 1.16
FXN-203ENST00000396366 DNAJC18Q9H819 358 aa22.31■■□□□ 1.16
FXN-203ENST00000396366 PDE3AQ14432 1141 aa22.3■■□□□ 1.16
FXN-203ENST00000396366 TREML2Q5T2D2 321 aa22.3■■□□□ 1.16
FXN-203ENST00000396366 TRIM47Q96LD4 638 aa22.3■■□□□ 1.16
FXN-203ENST00000396366 PARK7Q99497 189 aaKnown RBP22.3■■□□□ 1.16
FXN-203ENST00000396366 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
FXN-203ENST00000396366 IGSF3O75054 1194 aa22.29■■□□□ 1.16
FXN-203ENST00000396366 IFIT2P09913 472 aaKnown RBP22.29■■□□□ 1.16
FXN-203ENST00000396366 BCRP11274 1271 aa22.29■■□□□ 1.16
FXN-203ENST00000396366 PSMC4P43686 418 aa22.29■■□□□ 1.16
FXN-203ENST00000396366 MAP3K12Q12852 859 aa22.29■■□□□ 1.16
FXN-203ENST00000396366 RAB11FIP3O75154 756 aa22.28■■□□□ 1.16
FXN-203ENST00000396366 MYCP01106 439 aaPredicted RBP22.28■■□□□ 1.16
FXN-203ENST00000396366 METTL16Q86W50 562 aaKnown RBP22.28■■□□□ 1.16
FXN-203ENST00000396366 FOXP4Q8IVH2 680 aaPredicted RBP22.28■■□□□ 1.16
FXN-203ENST00000396366 ZNF280CQ8ND82 737 aa22.28■■□□□ 1.16
FXN-203ENST00000396366 SH3TC2Q8TF17 1288 aa22.28■■□□□ 1.16
FXN-203ENST00000396366 EDC3Q96F86 508 aaKnown RBP22.28■■□□□ 1.16
FXN-203ENST00000396366 GOLIM4O00461 696 aa22.27■■□□□ 1.16
FXN-203ENST00000396366 FMNL1O95466 1100 aaPredicted RBP22.27■■□□□ 1.16
FXN-203ENST00000396366 SLC9C1Q4G0N8 1177 aa22.27■■□□□ 1.16
FXN-203ENST00000396366 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
FXN-203ENST00000396366 ZNF333Q96JL9 665 aa22.27■■□□□ 1.16
FXN-203ENST00000396366 DNAJC2Q99543 621 aaKnown RBP22.27■■□□□ 1.16
FXN-203ENST00000396366 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
FXN-203ENST00000396366 BRCA2P51587 3418 aa22.27■■□□□ 1.16
FXN-203ENST00000396366 MYH1P12882 1939 aa22.27■■□□□ 1.16
FXN-203ENST00000396366 USP17L5A8MUK1 530 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 SMARCA5O60264 1052 aaPredicted RBP22.26■■□□□ 1.15
FXN-203ENST00000396366 GDF11O95390 407 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 OSBPP22059 807 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 USP5P45974 858 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 HMGCS2P54868 508 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 AGTPBP1Q9UPW5 1226 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 SLC45A1Q9Y2W3 748 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 PDE4DIPQ5VU43 2346 aa22.26■■□□□ 1.15
FXN-203ENST00000396366 KIAA0100Q14667 2235 aaKnown RBP22.25■■□□□ 1.15
FXN-203ENST00000396366 GNRH1P01148 92 aa22.25■■□□□ 1.15
FXN-203ENST00000396366 EN2P19622 333 aaPredicted RBP22.25■■□□□ 1.15
FXN-203ENST00000396366 SLFNL1Q499Z3 407 aa22.25■■□□□ 1.15
FXN-203ENST00000396366 SLC9C2Q5TAH2 1124 aa22.25■■□□□ 1.15
FXN-203ENST00000396366 RIOK1Q9BRS2 568 aaKnown RBP22.25■■□□□ 1.15
FXN-203ENST00000396366 TRIM34Q9BYJ4 488 aa22.25■■□□□ 1.15
FXN-203ENST00000396366 SRRDQ9UH36 339 aa22.25■■□□□ 1.15
FXN-203ENST00000396366 PDE6AP16499 860 aa22.24■■□□□ 1.15
FXN-203ENST00000396366 TTF1Q15361 905 aaPredicted RBP22.24■■□□□ 1.15
FXN-203ENST00000396366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.24■■□□□ 1.15
FXN-203ENST00000396366 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
FXN-203ENST00000396366 MGAMO43451 1857 aa22.24■■□□□ 1.15
FXN-203ENST00000396366 MAGEB6P1A0A0J9YX57 407 aa22.23■■□□□ 1.15
FXN-203ENST00000396366 HLA-DOAP06340 250 aa22.23■■□□□ 1.15
FXN-203ENST00000396366 NBPF11Q86T75 865 aa22.23■■□□□ 1.15
FXN-203ENST00000396366 SMCR8Q8TEV9 937 aaPredicted RBP22.23■■□□□ 1.15
FXN-203ENST00000396366 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
FXN-203ENST00000396366 LOC285556D6RIA3 1793 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 MKI67P46013 3256 aaKnown RBP22.22■■□□□ 1.15
FXN-203ENST00000396366 TCRBV5S4A2TA0A5A2 114 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 EVX2Q03828 476 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 MTMR2Q13614 643 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 ANKRD13CQ8N6S4 541 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 PROCA1Q8NCQ7 364 aaPredicted RBP22.22■■□□□ 1.15
FXN-203ENST00000396366 WDR18Q9BV38 432 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 GABRQQ9UN88 632 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 MYPNQ86TC9 1320 aa22.22■■□□□ 1.15
FXN-203ENST00000396366 RBBP6Q7Z6E9 1792 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms