RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 EPB41L4AQ9HCS5 686 aaPredicted RBP25.38■■□□□ 1.65
FXN-202ENST00000396364 SWAP70Q9UH65 585 aa25.38■■□□□ 1.65
FXN-202ENST00000396364 U3KPZ7 1027 aaPredicted RBP25.38■■□□□ 1.65
FXN-202ENST00000396364 UNCXA6NJT0 531 aa25.37■■□□□ 1.65
FXN-202ENST00000396364 TMEM88BA6NKF7 163 aa25.37■■□□□ 1.65
FXN-202ENST00000396364 FGAP02671 866 aa25.37■■□□□ 1.65
FXN-202ENST00000396364 IMMTQ16891 758 aaKnown RBP25.36■■□□□ 1.65
FXN-202ENST00000396364 SLC4A8Q2Y0W8 1093 aa25.36■■□□□ 1.65
FXN-202ENST00000396364 DLK2Q6UY11 383 aa25.36■■□□□ 1.65
FXN-202ENST00000396364 MIGA2Q7L4E1 593 aa25.36■■□□□ 1.65
FXN-202ENST00000396364 ANGEL1Q9UNK9 670 aaKnown RBP25.36■■□□□ 1.65
FXN-202ENST00000396364 ZNF213O14771 459 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 APLP1P51693 650 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 MAP3K10Q02779 954 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 METTL16Q86W50 562 aaKnown RBP25.35■■□□□ 1.65
FXN-202ENST00000396364 CDAN1Q8IWY9 1227 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 IL25Q9H293 177 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 SSC5DA1L4H1 1573 aa25.35■■□□□ 1.65
FXN-202ENST00000396364 PLCD1P51178 756 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
FXN-202ENST00000396364 PDE4BQ07343 736 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 PPARAQ07869 468 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 PRKG1Q13976 671 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 MAP3K11Q16584 847 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 CSADQ9Y600 493 aa25.34■■□□□ 1.65
FXN-202ENST00000396364 MYH8P13535 1937 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 ROBO3Q96MS0 1386 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 FOXP2O15409 715 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 EPB41L2O43491 1005 aaKnown RBP25.33■■□□□ 1.65
FXN-202ENST00000396364 CST9Q5W186 159 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 ANKRD13AQ8IZ07 590 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 MAP4K1Q92918 833 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 WRNIP1Q96S55 665 aa25.33■■□□□ 1.65
FXN-202ENST00000396364 USP2O75604 605 aaPredicted RBP25.32■■□□□ 1.64
FXN-202ENST00000396364 CYP2D6P10635 497 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 PCP11498 1178 aaKnown RBP25.32■■□□□ 1.64
FXN-202ENST00000396364 C1QTNF8P60827 252 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 RNF20Q5VTR2 975 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 KLRG1Q96E93 195 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 RNF41Q9H4P4 317 aaPredicted RBP25.32■■□□□ 1.64
FXN-202ENST00000396364 MKNK2Q9HBH9 465 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 CREBZFQ9NS37 354 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 ANAPC4Q9UJX5 808 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 ABT1Q9ULW3 272 aaKnown RBP25.32■■□□□ 1.64
FXN-202ENST00000396364 SIPA1L1O43166 1804 aa25.32■■□□□ 1.64
FXN-202ENST00000396364 LAMA4Q16363 1823 aa25.31■■□□□ 1.64
FXN-202ENST00000396364 NT5C2P49902 561 aa25.31■■□□□ 1.64
FXN-202ENST00000396364 MAP3K9P80192 1104 aa25.31■■□□□ 1.64
FXN-202ENST00000396364 C16orf86Q6ZW13 317 aa25.31■■□□□ 1.64
FXN-202ENST00000396364 LSG1Q9H089 658 aaKnown RBP25.31■■□□□ 1.64
FXN-202ENST00000396364 GINM1Q9NU53 330 aa25.31■■□□□ 1.64
FXN-202ENST00000396364 CYP2D7A0A087X1C5 515 aa25.3■■□□□ 1.64
FXN-202ENST00000396364 CTNND1O60716 968 aaKnown RBP25.3■■□□□ 1.64
FXN-202ENST00000396364 PTH1RQ03431 593 aa25.3■■□□□ 1.64
FXN-202ENST00000396364 GABPAQ06546 454 aa25.3■■□□□ 1.64
FXN-202ENST00000396364 ZNF112Q9UJU3 913 aa25.3■■□□□ 1.64
FXN-202ENST00000396364 HUNKP57058 714 aa25.29■■□□□ 1.64
FXN-202ENST00000396364 CERKLQ49MI3 558 aaPredicted RBP25.29■■□□□ 1.64
FXN-202ENST00000396364 TATDN1Q6P1N9 297 aa25.29■■□□□ 1.64
FXN-202ENST00000396364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.29■■□□□ 1.641e-9■■■■■ 38.8
FXN-202ENST00000396364 CCDC17Q96LX7 622 aa25.29■■□□□ 1.64
FXN-202ENST00000396364 RBM8AQ9Y5S9 174 aaKnown RBP25.29■■□□□ 1.64
FXN-202ENST00000396364 TLL2Q9Y6L7 1015 aa25.29■■□□□ 1.64
FXN-202ENST00000396364 CDK8P49336 464 aa25.28■■□□□ 1.64
FXN-202ENST00000396364 ZNF444Q8N0Y2 327 aaPredicted RBP25.28■■□□□ 1.64
FXN-202ENST00000396364 HHIPL1Q96JK4 782 aa25.28■■□□□ 1.64
FXN-202ENST00000396364 CABP5Q9NP86 173 aa25.28■■□□□ 1.64
FXN-202ENST00000396364 PICK1Q9NRD5 415 aa25.28■■□□□ 1.64
FXN-202ENST00000396364 FAM196BA6NMK8 535 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 UBE2Q2LH0YL09 131 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 MCCP23508 829 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 LDLRAD1Q5T700 205 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 MFSD6Q6ZSS7 791 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 SAPCD2Q86UD0 394 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 DYNLL2Q96FJ2 89 aa25.27■■□□□ 1.64
FXN-202ENST00000396364 PHF20L1A8MW92 1017 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 ASNSP08243 561 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 HAND2P61296 217 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 CTDSPL2Q05D32 466 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
FXN-202ENST00000396364 AKNAD1Q5T1N1 836 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 SCYL3Q8IZE3 742 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 SLC10A4Q96EP9 437 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 DNAJC18Q9H819 358 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 CNNM2Q9H8M5 875 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 TOMM22Q9NS69 142 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 DOCK1Q14185 1865 aa25.26■■□□□ 1.63
FXN-202ENST00000396364 ZKSCAN1P17029 563 aaPredicted RBP25.25■■□□□ 1.63
FXN-202ENST00000396364 SHMT1P34896 483 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 CAP2P40123 477 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 TRDNQ13061 729 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 ABCB5Q2M3G0 1257 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 MOB2Q70IA6 237 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 STAG1Q8WVM7 1258 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 TBC1D2Q9BYX2 928 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 FZD1Q9UP38 647 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 OTOFQ9HC10 1997 aa25.25■■□□□ 1.63
FXN-202ENST00000396364 ATAD5Q96QE3 1844 aa25.24■■□□□ 1.63
FXN-202ENST00000396364 HSPA6P17066 643 aa25.24■■□□□ 1.63
FXN-202ENST00000396364 INPP5BP32019 993 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms