RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SMTNL1A8MU46 457 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 AP5Z1O43299 807 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 GADD45BO75293 160 aaPredicted RBP6.23□□□□□ -1.41
VPS41-203ENST00000395969 CAPN2P17655 700 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 SLC16A10Q8TF71 515 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 MPHOSPH8Q99549 860 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 MAF1Q9H063 256 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 GPR75-ASB3A0A0A6YYF3 556 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 DDAH1O94760 285 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 APPP05067 770 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 NPR1P16066 1061 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
VPS41-203ENST00000395969 UBE2HP62256 183 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 BRAPQ7Z569 592 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 ARPP21Q9UBL0 812 aaPredicted RBP6.23□□□□□ -1.41
VPS41-203ENST00000395969 RCOR1Q9UKL0 485 aa6.23□□□□□ -1.41
VPS41-203ENST00000395969 A0A1W2PQ27 194 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 A0A1W2PQ64 194 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 A0A1W2PQD8 194 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 GNPATO15228 680 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 LARGE1O95461 756 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 ST5P78524 1137 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 DDR1Q08345 913 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 FUT2Q10981 343 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 ORC2Q13416 577 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 TXNRD1Q16881 649 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 CAVIN4Q5BKX8 364 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 DDX46Q7L014 1031 aaKnown RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 PTF1AQ7RTS3 328 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 NBPF11Q86T75 865 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 USP48Q86UV5 1035 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 IFNL3Q8IZI9 196 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 ACSBG1Q96GR2 724 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 EHD4Q9H223 541 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 LY9Q9HBG7 655 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SEC31BQ9NQW1 1179 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SCN9AQ15858 1988 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 A0A0G2JMZ2 1700 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 CALM1P0DP23 149 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 CALM2P0DP24 149 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 CALM3P0DP25 149 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 SCRN1Q12765 414 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 AKNAD1Q5T1N1 836 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 KRT222Q8N1A0 295 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SCAND2PQ9GZW5 306 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 COA1Q9GZY4 146 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 TSPYL1Q9H0U9 437 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SH3GLB2Q9NR46 395 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 POLR3EQ9NVU0 708 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 RGS17Q9UGC6 210 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 ANGEL1Q9UNK9 670 aaKnown RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 ADAMTSL1Q8N6G6 1762 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 LTBP3Q9NS15 1303 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SLC26A4O43511 780 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 CDKL5O76039 1030 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 SRGNP10124 158 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 IFNAR1P17181 557 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 GPTP24298 496 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 TNNT3P45378 269 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 CELF1Q92879 486 aaKnown RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 POM121Q96HA1 1249 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
VPS41-203ENST00000395969 TAF6LQ9Y6J9 622 aa6.22□□□□□ -1.41
VPS41-203ENST00000395969 ATAD5Q96QE3 1844 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 IGKV6D-41A0A0C4DH26 115 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 YEATS4O95619 227 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 CHRM1P11229 460 aaPredicted RBP6.21□□□□□ -1.41
VPS41-203ENST00000395969 PLCG2P16885 1265 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 RFC4P35249 363 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 PDE6BP35913 854 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.41
VPS41-203ENST00000395969 SLC9C2Q5TAH2 1124 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 NBPF5PQ86XG9 351 aaPredicted RBP6.21□□□□□ -1.41
VPS41-203ENST00000395969 CNBD1Q8NA66 436 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 MTMR14Q8NCE2 650 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 DAGLBQ8NCG7 672 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 NACAP1Q9BZK3 213 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 RTEL1Q9NZ71 1219 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 WWC3Q9ULE0 1092 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 PAXBP1Q9Y5B6 917 aa6.21□□□□□ -1.41
VPS41-203ENST00000395969 STK25O00506 426 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 ZNF213O14771 459 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 FMNL1O95466 1100 aaPredicted RBP6.21□□□□□ -1.42
VPS41-203ENST00000395969 FDPSP14324 419 aaKnown RBP6.21□□□□□ -1.42
VPS41-203ENST00000395969 ALDH1B1P30837 517 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 HIBADHP31937 336 aaKnown RBP6.21□□□□□ -1.42
VPS41-203ENST00000395969 HHIPL2Q6UWX4 724 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 Q6ZUG5 572 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 TBC1D10CQ8IV04 446 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 SLF2Q8IX21 1173 aa6.21□□□□□ -1.42
VPS41-203ENST00000395969 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
VPS41-203ENST00000395969 RBM28Q9NW13 759 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms