RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 BZW1Q7L1Q6 419 aaKnown RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 SDCCAG8Q86SQ7 713 aaPredicted RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 MRPL50Q8N5N7 158 aaKnown RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 CCDC47Q96A33 483 aaKnown RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 ALS2CR12Q96Q35 445 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 EPAS1Q99814 870 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 LRRCC1Q9C099 1032 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 GOLGA6AQ9NYA3 693 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 PUF60Q9UHX1 559 aaKnown RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 CDC23Q9UJX2 597 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 ZNF202O95125 648 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 FERP16591 822 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 PDE1AP54750 535 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 KRT24Q2M2I5 525 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 CCDC83Q8IWF9 413 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 ANKRD24Q8TF21 1146 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 PGBD1Q96JS3 809 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 ZSCAN31Q96LW9 406 aaPredicted RBP10.96□□□□□ -0.66
CDRT1-204ENST00000395906 SPAG5Q96R06 1193 aa10.96□□□□□ -0.66
CDRT1-204ENST00000395906 RANBP17Q9H2T7 1088 aaKnown RBP10.96□□□□□ -0.66
CDRT1-204ENST00000395906 ACTR5Q9H9F9 607 aaPredicted RBP10.96□□□□□ -0.66
CDRT1-204ENST00000395906 SH2B1Q9NRF2 756 aaPredicted RBP10.96□□□□□ -0.66
CDRT1-204ENST00000395906 TPX2Q9ULW0 747 aaKnown RBP10.96□□□□□ -0.66
CDRT1-204ENST00000395906 LIN7AO14910 233 aaPredicted RBP10.95□□□□□ -0.66
CDRT1-204ENST00000395906 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 ATP5JP18859 108 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 ALDH1B1P30837 517 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 USP4Q13107 963 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 STIM1Q13586 685 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 SLMAPQ14BN4 828 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 LARP1BQ659C4 914 aaKnown RBP10.95□□□□□ -0.66
CDRT1-204ENST00000395906 RPAP2Q8IXW5 612 aaPredicted RBP10.95□□□□□ -0.66
CDRT1-204ENST00000395906 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 LZTS2Q9BRK4 669 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 EHD4Q9H223 541 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 GGA2Q9UJY4 613 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 MYL1P05976 194 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 PDCP20941 246 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 DBN1Q16643 649 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 TRIM42Q8IWZ5 723 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 IQCGQ9H095 443 aaKnown RBP10.95□□□□□ -0.66
CDRT1-204ENST00000395906 NLRP2Q9NX02 1062 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
CDRT1-204ENST00000395906 ZC3H4Q9UPT8 1303 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 DCCP43146 1447 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 RASA3Q14644 834 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 RNF187Q5TA31 235 aaPredicted RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 FUKQ8N0W3 1084 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 CCDC114Q96M63 670 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 BPIFA3Q9BQP9 254 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 RABEP2Q9H5N1 569 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 OPA1O60313 960 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 MCM3P25205 808 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 PDE6BP35913 854 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 G3BP1Q13283 466 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 DDX46Q7L014 1031 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 CDC37L1Q7L3B6 337 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 FERMT3Q86UX7 667 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 TSPYL6Q8N831 410 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 SH3GL2Q99962 352 aa10.94□□□□□ -0.66
CDRT1-204ENST00000395906 PAPOLBQ9NRJ5 636 aaKnown RBP10.94□□□□□ -0.66
CDRT1-204ENST00000395906 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 LTN1O94822 1766 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 GGCXP38435 758 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 SFSWAPQ12872 951 aaKnown RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 LRRC23Q53EV4 343 aaPredicted RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 MTHFD1LQ6UB35 978 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 CCDC170Q8IYT3 715 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 SMARCC2Q8TAQ2 1214 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 ZFAND2BQ8WV99 257 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 BIN1O00499 593 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 TPD52L2O43399 206 aaKnown RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 LARGE1O95461 756 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 NBPF7P0C2Y1 421 aaPredicted RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 RASSF8Q8NHQ8 419 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 COG1Q8WTW3 980 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 BICD1Q96G01 975 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 API5Q9BZZ5 524 aaKnown RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
CDRT1-204ENST00000395906 SNX14Q9Y5W7 946 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms