RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 XAGE2Q96GT9 111 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 SELENOSQ9BQE4 189 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC94Q9BW85 323 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 B4E1Z4 1266 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 IFT20Q8IY31 132 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 CABLES1Q8TDN4 633 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 UBLCP1Q8WVY7 318 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 GPHNQ9NQX3 736 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-204ENST00000395898 TSPYL6Q8N831 410 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 IWS1Q96ST2 819 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 NT5C3AQ9H0P0 336 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 SYNRGQ9UMZ2 1314 aa6.09□□□□□ -1.43
VPS13C-204ENST00000395898 LMTK3Q96Q04 1460 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 INSRP06213 1382 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 EIF6P56537 245 aaKnown RBP6.09□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC25Q86WR0 208 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 CAPZA3Q96KX2 299 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 TSKSQ9UJT2 592 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 ZEB2O60315 1214 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 CSGALNACT2Q8N6G5 542 aa6.09□□□□□ -1.44
VPS13C-204ENST00000395898 KDM3AQ9Y4C1 1321 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF202O95125 648 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 IGSF22Q8N9C0 903 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 PHACTR3Q96KR7 559 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGEF35A5YM69 484 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 OTUD6AQ7L8S5 288 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 NKIRAS1Q9NYS0 192 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 VPS18Q9P253 973 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 PTPRKQ15262 1439 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 GIPC1O14908 333 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 SPOPO43791 374 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 SLC1A4P43007 532 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 BIRC3Q13489 604 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF174Q15697 407 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 AFAP1L2Q8N4X5 818 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 CARD14Q9BXL6 1004 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 GJC1P36383 396 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS13C-204ENST00000395898 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC169A6NNP5 214 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 TNFAIP3P21580 790 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 PPP2R3AQ06190 1150 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 HACE1Q8IYU2 909 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 NAPGQ99747 312 aaPredicted RBP6.08□□□□□ -1.44
VPS13C-204ENST00000395898 AATFQ9NY61 560 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS13C-204ENST00000395898 RSPH14Q9UHP6 348 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 IVNS1ABPQ9Y6Y0 642 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 DNM2P50570 870 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ASIC2Q16515 512 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 GEN1Q17RS7 908 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 SYT10Q6XYQ8 523 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 KRT25Q7Z3Z0 450 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 VPS52Q8N1B4 723 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 DSCC1Q9BVC3 393 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 KCNK9Q9NPC2 374 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 PARP2Q9UGN5 583 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 AK9Q5TCS8 1911 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 FLOT1O75955 427 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 POSTNQ15063 836 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 FCHSD1Q86WN1 690 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 TMTC1Q8IUR5 882 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 GPCPD1Q9NPB8 672 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 SGSM2O43147 1006 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 DAPK3O43293 454 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 UFL1O94874 794 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 PCP11498 1178 aaKnown RBP6.08□□□□□ -1.44
VPS13C-204ENST00000395898 RLBP1P12271 317 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 KDM2BQ8NHM5 1336 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ADGRL2O95490 1459 aa6.08□□□□□ -1.44
VPS13C-204ENST00000395898 ATP11AP98196 1134 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 C8orf74Q6P047 294 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 RUFY4Q6ZNE9 571 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 PIK3AP1Q6ZUJ8 805 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 MAIP1Q8WWC4 291 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 FYB2Q5VWT5 728 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 DPP8Q6V1X1 898 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC125Q86Z20 511 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ATP2A3Q93084 1043 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ARPP21Q9UBL0 812 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CCNL1Q9UK58 526 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 GCNT3O95395 438 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 KARSQ15046 597 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 AKNAD1Q5T1N1 836 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CCT6BQ92526 530 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 VPS16Q9H269 839 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 MRPL44Q9H9J2 332 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SAP30BPQ9UHR5 308 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ERVV-2B6SEH9 535 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 NOL3O60936 208 aaKnown RBP6.07□□□□□ -1.44
VPS13C-204ENST00000395898 LGSNQ5TDP6 509 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF365Q70YC5 407 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SRGAP1Q7Z6B7 1085 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 CNGA1P29973 690 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 ITIH3Q06033 890 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 STMN2Q93045 179 aa6.07□□□□□ -1.44
VPS13C-204ENST00000395898 SERPINA10Q9UK55 444 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms