RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 BRD4O60885 1362 aaPredicted RBP8.17□□□□□ -1.1
AP3S1-202ENST00000395548 KIAA0232Q92628 1395 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 NRXN1Q9ULB1 1477 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
AP3S1-202ENST00000395548 MZF1P28698 734 aaPredicted RBP8.16□□□□□ -1.1
AP3S1-202ENST00000395548 LBX1P52954 281 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 DNM1Q05193 864 aaKnown RBP8.16□□□□□ -1.1
AP3S1-202ENST00000395548 ZNF827Q17R98 1081 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 C10orf71Q711Q0 1435 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 SBF2Q86WG5 1849 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 NCAPG2Q86XI2 1143 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 ANKRD30BQ9BXX2 1392 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
AP3S1-202ENST00000395548 PARP4Q9UKK3 1724 aaKnown RBP8.16□□□□□ -1.1
AP3S1-202ENST00000395548 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 DLL1O00548 723 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 DEAF1O75398 565 aaPredicted RBP8.15□□□□□ -1.1
AP3S1-202ENST00000395548 KIF4AO95239 1232 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 MPSTP25325 297 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 EIF1AXP47813 144 aaKnown RBP8.15□□□□□ -1.1
AP3S1-202ENST00000395548 CEP135Q66GS9 1140 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
AP3S1-202ENST00000395548 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.11
AP3S1-202ENST00000395548 PLEKHG2Q9H7P9 1386 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 FAM13AO94988 1023 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 PDGFAP04085 211 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 AAMPQ13685 434 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 C8orf34Q49A92 452 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 B4GALNT3Q6L9W6 998 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 WFDC12Q8WWY7 111 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 PMEPA1Q969W9 287 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
AP3S1-202ENST00000395548 PNPLA7Q6ZV29 1317 aa8.13□□□□□ -1.11
AP3S1-202ENST00000395548 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
AP3S1-202ENST00000395548 DYRK3O43781 588 aa8.13□□□□□ -1.11
AP3S1-202ENST00000395548 NPR3P17342 541 aa8.13□□□□□ -1.11
AP3S1-202ENST00000395548 TP53INP1Q96A56 240 aa8.13□□□□□ -1.11
AP3S1-202ENST00000395548 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
AP3S1-202ENST00000395548 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 IGSF1Q8N6C5 1336 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
AP3S1-202ENST00000395548 CES1P23141 567 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 CDC27P30260 824 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 USP5P45974 858 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 IREB2P48200 963 aaKnown RBP8.12□□□□□ -1.11
AP3S1-202ENST00000395548 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
AP3S1-202ENST00000395548 ATP11AP98196 1134 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 FKBP4Q02790 459 aaKnown RBP eCLIP8.12□□□□□ -1.11
AP3S1-202ENST00000395548 WAPLQ7Z5K2 1190 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 CEP120Q8N960 986 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
AP3S1-202ENST00000395548 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 CNTN3Q9P232 1028 aa8.12□□□□□ -1.11
AP3S1-202ENST00000395548 PAPPAQ13219 1627 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
AP3S1-202ENST00000395548 EHHADHQ08426 723 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 TMEM130Q8N3G9 435 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
AP3S1-202ENST00000395548 LACRTQ9GZZ8 138 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 PXDNLA1KZ92 1463 aa8.11□□□□□ -1.11
AP3S1-202ENST00000395548 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 LINC01387J3KSC0 135 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 ABL1P00519 1130 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 PTPRAP18433 802 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 ITGB7P26010 798 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 NOS3P29474 1203 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 FAM117BQ6P1L5 589 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 HIRIP3Q9BW71 556 aaPredicted RBP8.1□□□□□ -1.11
AP3S1-202ENST00000395548 AKTIPQ9H8T0 292 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 SALL4Q9UJQ4 1053 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
AP3S1-202ENST00000395548 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.11
AP3S1-202ENST00000395548 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
AP3S1-202ENST00000395548 STK26Q9P289 416 aa8.09□□□□□ -1.11
AP3S1-202ENST00000395548 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
AP3S1-202ENST00000395548 DAPK1P53355 1430 aa8.09□□□□□ -1.11
AP3S1-202ENST00000395548 CRB1P82279 1406 aa8.09□□□□□ -1.11
AP3S1-202ENST00000395548 ANKRD50Q9ULJ7 1429 aa8.09□□□□□ -1.11
AP3S1-202ENST00000395548 ALS2Q96Q42 1657 aa8.08□□□□□ -1.12
AP3S1-202ENST00000395548 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
AP3S1-202ENST00000395548 PHRF1Q9P1Y6 1649 aaKnown RBP8.08□□□□□ -1.12
AP3S1-202ENST00000395548 ZMYM1Q5SVZ6 1142 aa8.08□□□□□ -1.12
AP3S1-202ENST00000395548 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
AP3S1-202ENST00000395548 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
AP3S1-202ENST00000395548 E9PCH4 1651 aa8.08□□□□□ -1.12
AP3S1-202ENST00000395548 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
AP3S1-202ENST00000395548 A6NHS1 94 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms