RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 GYS2P54840 703 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 KIAA0907Q7Z7F0 614 aaPredicted RBP11.2□□□□□ -0.62
PFDN6-205ENST00000395134 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 JDP2Q8WYK2 163 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 TMPRSS4Q9NRS4 437 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
PFDN6-205ENST00000395134 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 EIF3JO75822 258 aaKnown RBP11.19□□□□□ -0.62
PFDN6-205ENST00000395134 HMOX1P09601 288 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 SOX9P48436 509 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 MTHFSP49914 203 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 BCAMP50895 628 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 TEAD4Q15561 434 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
PFDN6-205ENST00000395134 HOMER1Q86YM7 354 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
PFDN6-205ENST00000395134 HCN4Q9Y3Q4 1203 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
PFDN6-205ENST00000395134 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
PFDN6-205ENST00000395134 TLL1O43897 1013 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
PFDN6-205ENST00000395134 CBLBQ13191 982 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 PWP1Q13610 501 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
PFDN6-205ENST00000395134 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 RELL1Q8IUW5 271 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 LILRB2Q8N423 598 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
PFDN6-205ENST00000395134 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 GEMIN8Q9NWZ8 242 aaKnown RBP11.18□□□□□ -0.62
PFDN6-205ENST00000395134 PRKAG3Q9UGI9 489 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
PFDN6-205ENST00000395134 SBF1O95248 1867 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 C10orf71Q711Q0 1435 aa11.18□□□□□ -0.62
PFDN6-205ENST00000395134 ADAMTS7Q9UKP4 1686 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 POTECB2RU33 542 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 HMGB2P26583 209 aaKnown RBP11.17□□□□□ -0.62
PFDN6-205ENST00000395134 IL13P35225 146 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
PFDN6-205ENST00000395134 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 NXPE4Q6UWF7 544 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 CCDC113Q9H0I3 377 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
PFDN6-205ENST00000395134 ADCY9O60503 1353 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 RFC4P35249 363 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
PFDN6-205ENST00000395134 MASP1P48740 699 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 TBX4P57082 545 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
PFDN6-205ENST00000395134 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
PFDN6-205ENST00000395134 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
PFDN6-205ENST00000395134 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 GOLGA8CPA6NN73 597 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 ZPR1O75312 459 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 TNFRSF21O75509 655 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 GYS1P13807 737 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.62
PFDN6-205ENST00000395134 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
PFDN6-205ENST00000395134 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.62
PFDN6-205ENST00000395134 ZDHHC1Q8WTX9 485 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 CPLX3Q8WVH0 158 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 BCO2Q9BYV7 579 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 ZFYVE28Q9HCC9 887 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 FOXD3Q9UJU5 478 aaPredicted RBP11.15□□□□□ -0.62
PFDN6-205ENST00000395134 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 MSRB2Q9Y3D2 182 aa11.15□□□□□ -0.62
PFDN6-205ENST00000395134 MRC1P22897 1456 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 RPS6KA4O75676 772 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 DPEP1P16444 411 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 TLR1Q15399 786 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 ODR4Q5SWX8 454 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 XKR5Q6UX68 686 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 FERMT3Q86UX7 667 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 IER2Q9BTL4 223 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 NT5C1AQ9BXI3 368 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 RAB6BQ9NRW1 208 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 TMEM260Q9NX78 707 aa11.14□□□□□ -0.63
PFDN6-205ENST00000395134 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms