RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SNAP23O00161 211 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 CCDC175P0C221 793 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 KCNJ6P48051 423 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 FAM193AP78312 1265 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 PPFIBP1Q86W92 1011 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 HELBQ8NG08 1087 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-203ENST00000395060 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 FAM205CA6NFA0 338 aa16.33■□□□□ 0.21
CLIP2-203ENST00000395060 KRI1Q8N9T8 703 aaKnown RBP16.33■□□□□ 0.21
CLIP2-203ENST00000395060 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.21
CLIP2-203ENST00000395060 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.21
CLIP2-203ENST00000395060 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.21
CLIP2-203ENST00000395060 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
CLIP2-203ENST00000395060 STX10O60499 249 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
CLIP2-203ENST00000395060 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
CLIP2-203ENST00000395060 SLC35F6Q8N357 371 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 LAMA4Q16363 1823 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 MST1RQ04912 1400 aa16.33■□□□□ 0.2
CLIP2-203ENST00000395060 ENC1O14682 589 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 KIF5CO60282 957 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 CASP14P31944 242 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
CLIP2-203ENST00000395060 ANKZF1Q9H8Y5 726 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 RRP15Q9Y3B9 282 aaKnown RBP16.32■□□□□ 0.2
CLIP2-203ENST00000395060 SLIT3O75094 1523 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 AKR1B15C9JRZ8 316 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-203ENST00000395060 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
CLIP2-203ENST00000395060 CUTAO60888 179 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 GPTP24298 496 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 VSNL1P62760 191 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 ABCC6O95255 1503 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
CLIP2-203ENST00000395060 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 APPBP2Q92624 585 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 NOA1Q8NC60 698 aaKnown RBP16.31■□□□□ 0.2
CLIP2-203ENST00000395060 RIN2Q8WYP3 895 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-203ENST00000395060 VPS16Q9H269 839 aa16.31■□□□□ 0.2
CLIP2-203ENST00000395060 SPATA31A3Q5VYP0 1347 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 TUBB4AP04350 444 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 TBX2Q13207 712 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 SRGAP1Q7Z6B7 1085 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 CAPZA3Q96KX2 299 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 H7C1W4 665 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 MRPS25P82663 173 aaKnown RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 GSPT2Q8IYD1 628 aaKnown RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 SLF1Q9BQI6 1058 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 PPP6R2O75170 966 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 MCAMP43121 646 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 UBXN6Q9BZV1 441 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
CLIP2-203ENST00000395060 HOOK1Q9UJC3 728 aaKnown RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-203ENST00000395060 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 EVA1CP58658 441 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 GUCA1BQ9UMX6 200 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 PRDM1O75626 825 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 ACTN2P35609 894 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 PPARDQ03181 441 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-203ENST00000395060 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 LMO7Q8WWI1 1683 aa16.29■□□□□ 0.2
CLIP2-203ENST00000395060 CCDC151A5D8V7 595 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 SRGAP2O75044 1071 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 SAFBQ15424 915 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 HSP90B2PQ58FF3 399 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 IPO4Q8TEX9 1081 aaKnown RBP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 A0A0G2JS52 829 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 CDKL5O76039 1030 aa16.28■□□□□ 0.2
CLIP2-203ENST00000395060 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
CLIP2-203ENST00000395060 ZSWIM5Q9P217 1185 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms