RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 MAPK8IP1Q9UQF2 711 aa18.3■□□□□ 0.52
SMARCD1-202ENST00000394963 LDHCP07864 332 aa18.3■□□□□ 0.52
SMARCD1-202ENST00000394963 BTDP43251 543 aa18.3■□□□□ 0.52
SMARCD1-202ENST00000394963 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
SMARCD1-202ENST00000394963 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
SMARCD1-202ENST00000394963 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 ZSCAN10Q96SZ4 725 aaPredicted RBP18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 GPCPD1Q9NPB8 672 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 EEF2KMTQ96G04 330 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 ZNF202O95125 648 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 GRAMD1CQ8IYS0 662 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 ANO10Q9NW15 660 aa18.29■□□□□ 0.52
SMARCD1-202ENST00000394963 GPSM2P81274 684 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 OXER1Q8TDS5 423 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 CPLX3Q8WVH0 158 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 C16orf45Q96MC5 204 aaPredicted RBP18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 CCDC194A0A1B0GVG4 234 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 POLR2DO15514 142 aaKnown RBP18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 FGFR2P21802 821 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 CCDC34Q96HJ3 373 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 GOLPH3LQ9H4A5 285 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 LY9Q9HBG7 655 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 NRDCO43847 1150 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 FAM160A1Q05DH4 1040 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 CLEC17AQ6ZS10 378 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 NRBP1Q9UHY1 535 aa18.28■□□□□ 0.52
SMARCD1-202ENST00000394963 FAM205CA6NFA0 338 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 SLURP2P0DP57 97 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 PNOCQ13519 176 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 TMTC2Q8N394 836 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 CLSTN2Q9H4D0 955 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 LRRC47Q8N1G4 583 aaKnown RBP18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 WDR66Q8TBY9 1149 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
SMARCD1-202ENST00000394963 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.51
SMARCD1-202ENST00000394963 GRAPQ13588 217 aa18.27■□□□□ 0.51
SMARCD1-202ENST00000394963 GRIK5Q16478 980 aa18.27■□□□□ 0.51
SMARCD1-202ENST00000394963 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.51
SMARCD1-202ENST00000394963 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.51
SMARCD1-202ENST00000394963 ERCC3P19447 782 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 KIF23Q02241 960 aaPredicted RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 LRMPQ12912 555 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 STX1AQ16623 288 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 MRC1P22897 1456 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 FOXP2O15409 715 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 PFKFB1P16118 471 aa18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 DCP1AQ9NPI6 582 aaPredicted RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
SMARCD1-202ENST00000394963 CASP1P29466 404 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 KCNB2Q92953 911 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 TCHHQ07283 1943 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 TRMT44Q8IYL2 757 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 HOOK1Q9UJC3 728 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 XDHP47989 1333 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 RIC1Q4ADV7 1423 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 CHRNA5P30532 468 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 RASGRP2Q7LDG7 609 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 IGDCC4Q8TDY8 1250 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 VEZTQ9HBM0 779 aa18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 SEC63Q9UGP8 760 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-202ENST00000394963 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 CCAR2Q8N163 923 aaKnown RBP18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 PCMTD1Q96MG8 357 aaPredicted RBP18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 DEXIO95424 95 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 NBPF3Q9H094 633 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 ALS2Q96Q42 1657 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 NAPAP54920 295 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 SMARCC2Q8TAQ2 1214 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 TSC1Q92574 1164 aa18.24■□□□□ 0.51
SMARCD1-202ENST00000394963 C5P01031 1676 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 KIF5BP33176 963 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 GPIHBP1Q8IV16 184 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 LINC00301Q8NCQ3 95 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 CD209Q9NNX6 404 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms