RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MYL5Q02045 173 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ASIC2Q16515 512 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 INF2Q27J81 1249 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 CFAP157Q5JU67 520 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 NACA2Q9H009 215 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 COL17A1Q9UMD9 1497 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 HOXB7P09629 217 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 UAP1Q16222 522 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 RFX1P22670 979 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 CCDC122Q5T0U0 273 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 VPS16Q9H269 839 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ZNF532Q9HCE3 1301 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 LPXNO60711 386 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 TBC1D8BQ0IIM8 1120 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 SNX29Q8TEQ0 813 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 NCOA5Q9HCD5 579 aaKnown RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ANAPC4Q9UJX5 808 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ZHX1Q9UKY1 873 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 MAPK8IP1Q9UQF2 711 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 USP19O94966 1318 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 TLDC2A0PJX2 215 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 GCKRQ14397 625 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL4A6-203ENST00000394872 CALCRLQ16602 461 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 FAM227BQ96M60 508 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 DNM3Q9UQ16 869 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
COL4A6-203ENST00000394872 CRCPO75575 148 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 GPR162Q16538 588 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 MYCT1Q8N699 235 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 TBC1D22AQ8WUA7 517 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 LZTS2Q9BRK4 669 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 RHOXF2BP0C7M4 288 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 SMC1BQ8NDV3 1235 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 RHOXF2Q9BQY4 288 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 CSADQ9Y600 493 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-203ENST00000394872 CCT6BQ92526 530 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 MYL10Q9BUA6 226 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 SLAIN2Q9P270 581 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 KCNH3Q9ULD8 1083 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 CETN3O15182 167 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
COL4A6-203ENST00000394872 KRT19P08727 400 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 ZAP70P43403 619 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-203ENST00000394872 IBTKQ9P2D0 1353 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-203ENST00000394872 GTF2IP78347 998 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
COL4A6-203ENST00000394872 VAV2P52735 878 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 BAG1Q99933 345 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 LLPHQ9BRT6 129 aaKnown RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 TRIM7Q9C029 511 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 V9GYY5 206 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 ATP10AO60312 1499 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 LRWD1Q9UFC0 647 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 TUBB4BP68371 445 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 CSGALNACT2Q8N6G5 542 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 TTF2Q9UNY4 1162 aaKnown RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 STK10O94804 968 aaKnown RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 GCNT3O95395 438 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 ALDH3A1P30838 453 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 GABPAQ06546 454 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 GEN1Q17RS7 908 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 DIS3L2Q8IYB7 885 aaKnown RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 DYMQ7RTS9 669 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 GPR161Q8N6U8 529 aaKnown RBP11.59□□□□□ -0.55
COL4A6-203ENST00000394872 PAGR1Q9BTK6 254 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
COL4A6-203ENST00000394872 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
COL4A6-203ENST00000394872 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 IGSF22Q8N9C0 903 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 TESK2Q96S53 571 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-203ENST00000394872 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 IVLP07476 585 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 TFAP4Q01664 338 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 TRIM14Q14142 442 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 PHKBQ93100 1093 aa11.58□□□□□ -0.56
COL4A6-203ENST00000394872 TEKT1Q969V4 418 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms