RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 IPO11Q9UI26 975 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 TMEM232C9JQI7 657 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 GNGT2O14610 69 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 SPTLC2O15270 562 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 CACTINQ8WUQ7 758 aaKnown RBP14.83□□□□□ -0.04
USP49-203ENST00000394253 KRT4P19013 534 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 ALG1Q9BT22 464 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 RTL9Q8NET4 1388 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 SLC9C1Q4G0N8 1177 aa14.83□□□□□ -0.04
USP49-203ENST00000394253 MYH6P13533 1939 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 GRK7Q8WTQ7 553 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 WWC3Q9ULE0 1092 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 LMNB1P20700 586 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 MGARPQ8TDB4 240 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 TSPY3P0CV98 308 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 TSPY8P0CW00 308 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 RAD51AP2Q09MP3 1159 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 ELF2Q15723 593 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 RNF34Q969K3 372 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 PAIP2BQ9ULR5 123 aaKnown RBP14.82□□□□□ -0.04
USP49-203ENST00000394253 ZGPATQ8N5A5 531 aaKnown RBP14.82□□□□□ -0.04
USP49-203ENST00000394253 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 SECISBP2LQ93073 1101 aaKnown RBP14.82□□□□□ -0.04
USP49-203ENST00000394253 FRMD3A2A2Y4 597 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 U2AF2P26368 475 aaKnown RBP eCLIP14.82□□□□□ -0.04
USP49-203ENST00000394253 ESR2Q92731 530 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 MCF2P10911 925 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 MRRFQ96E11 262 aaKnown RBP14.82□□□□□ -0.04
USP49-203ENST00000394253 CRNKL1Q9BZJ0 848 aaKnown RBP14.82□□□□□ -0.04
USP49-203ENST00000394253 DACT1Q9NYF0 836 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 ABCC11Q96J66 1382 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 ESYT2A0FGR8 921 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 FLOT2Q14254 428 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 SULT6B1Q6IMI4 303 aa14.82□□□□□ -0.04
USP49-203ENST00000394253 GNAT3A8MTJ3 354 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 BCRP11274 1271 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 GNA11P29992 359 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 KRT2P35908 639 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 DYNC1I2Q13409 638 aaKnown RBP14.81□□□□□ -0.04
USP49-203ENST00000394253 TRMT1LQ7Z2T5 733 aaKnown RBP14.81□□□□□ -0.04
USP49-203ENST00000394253 DDX42Q86XP3 938 aaKnown RBP eCLIP14.81□□□□□ -0.04
USP49-203ENST00000394253 CCDC13Q8IYE1 715 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 NME8Q8N427 588 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 IGSF22Q8N9C0 903 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 PIP4K2CQ8TBX8 421 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 C11orf95C9JLR9 678 aaPredicted RBP14.81□□□□□ -0.04
USP49-203ENST00000394253 TBC1D32Q96NH3 1257 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 MAN1A1P33908 653 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 DTHD1Q6ZMT9 781 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 CDV3Q9UKY7 258 aaKnown RBP14.81□□□□□ -0.04
USP49-203ENST00000394253 STK24Q9Y6E0 443 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
USP49-203ENST00000394253 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 CDAN1Q8IWY9 1227 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 SCYL3Q8IZE3 742 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 TEX12Q9BXU0 123 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 ARHGAP44Q17R89 818 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
USP49-203ENST00000394253 LDHCP07864 332 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 MYL5Q02045 173 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
USP49-203ENST00000394253 RSAD2Q8WXG1 361 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 FNBP1Q96RU3 617 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
USP49-203ENST00000394253 SERPINB10P48595 397 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 PPP2R5AQ15172 486 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 FAM212AQ96EL1 285 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 MRPL28Q13084 256 aaKnown RBP14.8□□□□□ -0.04
USP49-203ENST00000394253 TRIM15Q9C019 465 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 RIC8AQ9NPQ8 531 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 SYNRGQ9UMZ2 1314 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 PRIM1P49642 420 aaKnown RBP14.8□□□□□ -0.04
USP49-203ENST00000394253 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 SUFUQ9UMX1 484 aa14.8□□□□□ -0.04
USP49-203ENST00000394253 KRT9P35527 623 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 ASIC2Q16515 512 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 RBM26Q5T8P6 1007 aaKnown RBP14.79□□□□□ -0.04
USP49-203ENST00000394253 SERPINI1Q99574 410 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 VAT1LQ9HCJ6 419 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 FHOD3Q2V2M9 1422 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 WBP4O75554 376 aaKnown RBP14.79□□□□□ -0.04
USP49-203ENST00000394253 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 RNF207Q6ZRF8 634 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 PEX26Q7Z412 305 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 TMTC1Q8IUR5 882 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 PHKBQ93100 1093 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
USP49-203ENST00000394253 KIAA2013Q8IYS2 634 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 NPR1P16066 1061 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 MRPS15P82914 257 aaKnown RBP14.79□□□□□ -0.04
USP49-203ENST00000394253 DCUN1D2Q6PH85 259 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 FCHSD1Q86WN1 690 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms