RNA–Protein interactions for RNA: ENST00000394072.7

TNS4-202, Transcript of tensin 4, humanhuman

TSL 1 (best)

Gene TNS4, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-202ENST00000394072 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
TNS4-202ENST00000394072 NEDD4P46934 1319 aa13.49□□□□□ -0.25
TNS4-202ENST00000394072 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 LY75O60449 1722 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 SEMA3EO15041 775 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNS4-202ENST00000394072 BCAMP50895 628 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 WASF1Q92558 559 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 NDUFA8P51970 172 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 STK38Q15208 465 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 E4F1Q66K89 784 aaPredicted RBP13.48□□□□□ -0.25
TNS4-202ENST00000394072 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 ARMT1Q9H993 441 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 L2HGDHQ9H9P8 463 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 IFNKQ9P0W0 207 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 LRP2BPQ9P2M1 347 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 THSD7AQ9UPZ6 1657 aa13.48□□□□□ -0.25
TNS4-202ENST00000394072 LAMB1P07942 1786 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 SPTLC2O15270 562 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 TDO2P48775 406 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 ALG1Q9BT22 464 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 COL4A1P02462 1669 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
TNS4-202ENST00000394072 KCNQ2O43526 872 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 PCP11498 1178 aaKnown RBP13.47□□□□□ -0.25
TNS4-202ENST00000394072 IARSP41252 1262 aaKnown RBP13.47□□□□□ -0.25
TNS4-202ENST00000394072 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 NTRK3Q16288 839 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 DPCR1Q3MIW9 517 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 DENND2AQ9ULE3 1009 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 SLC12A7Q9Y666 1083 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 SLC4A4Q9Y6R1 1079 aa13.47□□□□□ -0.25
TNS4-202ENST00000394072 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
TNS4-202ENST00000394072 IFNAR1P17181 557 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 FAM193AP78312 1265 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 HOMER1Q86YM7 354 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 NARFQ9UHQ1 456 aa13.46□□□□□ -0.25
TNS4-202ENST00000394072 CCDC196A0A1B0GTZ2 297 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 ERICH2A1L162 156 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 SNAP23O00161 211 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 CCP110O43303 1012 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 KCNJ6P48051 423 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 TRIM29Q14134 588 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 ZNF446Q9NWS9 450 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 BIN1O00499 593 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 PPP6R2O75170 966 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
TNS4-202ENST00000394072 CYP7A1P22680 504 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 CDC27P30260 824 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 NLRP12P59046 1061 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
TNS4-202ENST00000394072 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 KRT40Q6A162 431 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNS4-202ENST00000394072 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
TNS4-202ENST00000394072 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 FMNL1O95466 1100 aaPredicted RBP13.44□□□□□ -0.26
TNS4-202ENST00000394072 POLR3DP05423 398 aaPredicted RBP13.44□□□□□ -0.26
TNS4-202ENST00000394072 CMA1P23946 247 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 WTAPQ15007 396 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
TNS4-202ENST00000394072 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 TEX2Q8IWB9 1127 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 TIGD1Q96MW7 591 aa13.44□□□□□ -0.26
TNS4-202ENST00000394072 NOL10Q9BSC4 688 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms