RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 BZW2Q9Y6E2 419 aaKnown RBP12.86□□□□□ -0.35
LAMB1-203ENST00000393560 PPP2R3AQ06190 1150 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 TYRO3Q06418 890 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 ANO6Q4KMQ2 910 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 RNF187Q5TA31 235 aaPredicted RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 SLC7A5P2Q9GIP4 190 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 PREBQ9HCU5 417 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 TUBGCP4Q9UGJ1 667 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 CEP104O60308 925 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 IRAK1P51617 712 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 PABPC4Q13310 644 aaKnown RBP eCLIP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 TMED1Q13445 227 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 BTG3Q14201 252 aaPredicted RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 POSTNQ15063 836 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 LONRF3Q496Y0 759 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
LAMB1-203ENST00000393560 TTC41PQ6P2S7 1318 aa12.85□□□□□ -0.35
LAMB1-203ENST00000393560 GFPT2O94808 682 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 HDAC4P56524 1084 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 CEBPZQ03701 1054 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 NME9Q86XW9 330 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 TSPYL6Q8N831 410 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 ADAMTS13Q76LX8 1427 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 CYB5D1Q6P9G0 228 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 MAGEC3Q8TD91 643 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 PIDD1Q9HB75 910 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 TMEM221A6NGB7 291 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 FIBPO43427 364 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 TPPPO94811 219 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 TXLNAP40222 546 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 CAMK4Q16566 473 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 NAT10Q9H0A0 1025 aaKnown RBP12.84□□□□□ -0.35
LAMB1-203ENST00000393560 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
LAMB1-203ENST00000393560 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 PTK7Q13308 1070 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 NUGGCQ68CJ6 796 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 RSRC2Q7L4I2 434 aaKnown RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 PCMTD2Q9NV79 361 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 NSD2O96028 1365 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 EIF4E1BA6NMX2 242 aaKnown RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 ATP4AP20648 1035 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 CASP8Q14790 479 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
LAMB1-203ENST00000393560 TMCO5AQ8N6Q1 288 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
LAMB1-203ENST00000393560 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 C3P01024 1663 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 GNAI3P08754 354 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
LAMB1-203ENST00000393560 DMPKQ09013 629 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 ATF7IPQ6VMQ6 1270 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 CCDC170Q8IYT3 715 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
LAMB1-203ENST00000393560 STAMBPL1Q96FJ0 436 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 CDC25BP30305 580 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
LAMB1-203ENST00000393560 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms