RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 STARD3NLO95772 234 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 ITGA6P23229 1130 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 CTSWP56202 376 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
COL17A1-203ENST00000393211 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 TOM1L2Q6ZVM7 507 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 RAB11FIP4Q86YS3 637 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 RABGGTAQ92696 567 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 PHKBQ93100 1093 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 CLIC6Q96NY7 704 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 UBXN6Q9BZV1 441 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
COL17A1-203ENST00000393211 CNNM1Q9NRU3 951 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
COL17A1-203ENST00000393211 MROH5Q6ZUA9 1318 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 LRP5O75197 1615 aa11.44□□□□□ -0.58
COL17A1-203ENST00000393211 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
COL17A1-203ENST00000393211 IFIT3O14879 490 aaKnown RBP11.43□□□□□ -0.58
COL17A1-203ENST00000393211 SEMA3EO15041 775 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 IGSF3O75054 1194 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 CDK11BP21127 795 aaKnown RBP11.43□□□□□ -0.58
COL17A1-203ENST00000393211 BMP6P22004 513 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 PLCD1P51178 756 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 TC2NQ8N9U0 490 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 LPIN2Q92539 896 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 MRFAP1Q9Y605 127 aa11.43□□□□□ -0.58
COL17A1-203ENST00000393211 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 TMEM232C9JQI7 657 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 IDH1O75874 414 aaKnown RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 BMP15O95972 392 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 CYP2C19P33261 490 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 TOB1P50616 345 aaPredicted RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 PDE4BQ07343 736 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NR1I3Q14994 352 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 PUM3Q15397 648 aaKnown RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 RSRC2Q7L4I2 434 aaKnown RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 DIS3L2Q8IYB7 885 aaKnown RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 IFNL3Q8IZI9 196 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 LRRN4CLQ8ND94 238 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 CTAGE1Q96RT6 745 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NACAP1Q9BZK3 213 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NAPBQ9H115 298 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 RNF41Q9H4P4 317 aaPredicted RBP11.42□□□□□ -0.58
COL17A1-203ENST00000393211 TMOD3Q9NYL9 352 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 RAI14Q9P0K7 980 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 ZSWIM5Q9P217 1185 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NFE2L3Q9Y4A8 694 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 PNPLA7Q6ZV29 1317 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 ERICH2A1L162 156 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 POTEB2H3BUK9 544 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 NPHP1O15259 732 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 PDE8AO60658 829 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 FGFR2P21802 821 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 GNG11P61952 73 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 RTN1Q16799 776 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 CCDC51Q96ER9 411 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 GREM2Q9H772 168 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
COL17A1-203ENST00000393211 COL22A1Q8NFW1 1626 aaPredicted RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 BTBD18B2RXH4 712 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 AKR1B15C9JRZ8 316 aaPredicted RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 POLR2DO15514 142 aaKnown RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 CCDC175P0C221 793 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 XBP1P17861 261 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 WTAPQ15007 396 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 BRD3Q15059 726 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 CC2D1AQ6P1N0 951 aaPredicted RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 CRACR2BQ8N4Y2 399 aaPredicted RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 MSL3Q8N5Y2 521 aaKnown RBP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 GOLGA1Q92805 767 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 KIFC2Q96AC6 838 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 AATFQ9NY61 560 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL17A1-203ENST00000393211 SERTAD1Q9UHV2 236 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
COL17A1-203ENST00000393211 MYO5AQ9Y4I1 1855 aaKnown RBP11.4□□□□□ -0.58
COL17A1-203ENST00000393211 BCORQ6W2J9 1755 aa11.4□□□□□ -0.58
COL17A1-203ENST00000393211 ERVV-1B6SEH8 477 aa11.4□□□□□ -0.58
COL17A1-203ENST00000393211 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
COL17A1-203ENST00000393211 FANCGO15287 622 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms