RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SDR42E1Q8WUS8 393 aa15.83■□□□□ 0.12
USP44-202ENST00000393091 CLRN2A0PK11 232 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 POTEJP0CG39 1038 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 ANAPC15P60006 121 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 KRT26Q7Z3Y9 468 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 LDLRAD1Q5T700 205 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 BACH2Q9BYV9 841 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
USP44-202ENST00000393091 HLA-DOAP06340 250 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 PPARAQ07869 468 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 RBM26Q5T8P6 1007 aaKnown RBP15.81■□□□□ 0.12
USP44-202ENST00000393091 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 MAPKAPK5Q8IW41 473 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 DNAJC18Q9H819 358 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 AMOTL1Q8IY63 956 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 NAPBQ9H115 298 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 UTRNP46939 3433 aa15.81■□□□□ 0.12
USP44-202ENST00000393091 IGKV6D-41A0A0C4DH26 115 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 ZNF341Q9BYN7 854 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 USP17L12C9JPN9 530 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 USP17L21D6R901 530 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 SHMT1P34896 483 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
USP44-202ENST00000393091 PLCD1P51178 756 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP44-202ENST00000393091 ZNF287Q9HBT7 754 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
USP44-202ENST00000393091 USP2O75604 605 aaPredicted RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 KIAA1211Q6ZU35 1233 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 VEZTQ9HBM0 779 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 RBM8AQ9Y5S9 174 aaKnown RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 A0A0G2JMZ2 1700 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 ADM5C9JUS6 153 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 CACNB3P54284 484 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 KLRG1Q96E93 195 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 TM6SF1Q9BZW5 370 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 ANKS1AQ92625 1134 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 CSRNP1Q96S65 589 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 RNF41Q9H4P4 317 aaPredicted RBP15.79■□□□□ 0.12
USP44-202ENST00000393091 CNNM2Q9H8M5 875 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
USP44-202ENST00000393091 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
USP44-202ENST00000393091 NBPF12Q5TAG4 269 aaPredicted RBP15.78■□□□□ 0.12
USP44-202ENST00000393091 GLIS2Q9BZE0 524 aaPredicted RBP15.78■□□□□ 0.12
USP44-202ENST00000393091 SLC27A2O14975 620 aa15.78■□□□□ 0.12
USP44-202ENST00000393091 CYP21A2P08686 494 aa15.78■□□□□ 0.12
USP44-202ENST00000393091 PALD1Q9ULE6 856 aa15.78■□□□□ 0.12
USP44-202ENST00000393091 TDO2P48775 406 aa15.77■□□□□ 0.12
USP44-202ENST00000393091 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.12
USP44-202ENST00000393091 CREB3L3Q68CJ9 461 aa15.77■□□□□ 0.12
USP44-202ENST00000393091 KRT32Q14532 448 aa15.77■□□□□ 0.12
USP44-202ENST00000393091 PPP4R3BQ5MIZ7 849 aa15.77■□□□□ 0.12
USP44-202ENST00000393091 CDK8P49336 464 aa15.77■□□□□ 0.11
USP44-202ENST00000393091 PICALMQ13492 652 aa15.77■□□□□ 0.11
USP44-202ENST00000393091 RNF20Q5VTR2 975 aa15.77■□□□□ 0.11
USP44-202ENST00000393091 CST9Q5W186 159 aa15.77■□□□□ 0.11
USP44-202ENST00000393091 ZNF213O14771 459 aa15.76■□□□□ 0.11
USP44-202ENST00000393091 NF2P35240 595 aa15.76■□□□□ 0.11
USP44-202ENST00000393091 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
USP44-202ENST00000393091 POLR3DP05423 398 aaPredicted RBP15.76■□□□□ 0.11
USP44-202ENST00000393091 RASA1P20936 1047 aa15.76■□□□□ 0.11
USP44-202ENST00000393091 PDE4BQ07343 736 aa15.76■□□□□ 0.11
USP44-202ENST00000393091 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
USP44-202ENST00000393091 CYP2D6P10635 497 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 CCDC178Q5BJE1 867 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 KRT23Q9C075 422 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 RLFQ13129 1914 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 CAP2P40123 477 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 TCP10Q12799 353 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 CDAN1Q8IWY9 1227 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 ANO2Q9NQ90 1003 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 NID2Q14112 1375 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 WDR18Q9BV38 432 aa15.75■□□□□ 0.11
USP44-202ENST00000393091 IREB2P48200 963 aaKnown RBP15.74■□□□□ 0.11
USP44-202ENST00000393091 ARMC9Q7Z3E5 817 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
USP44-202ENST00000393091 MKL1Q969V6 931 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 AGXT2Q9BYV1 514 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP44-202ENST00000393091 SAP30BPQ9UHR5 308 aaKnown RBP15.74■□□□□ 0.11
USP44-202ENST00000393091 SEC24BO95487 1268 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
USP44-202ENST00000393091 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
USP44-202ENST00000393091 E7EWF7 191 aa15.73■□□□□ 0.11
USP44-202ENST00000393091 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms