RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ATG3Q9NT62 314 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 ERVV-1B6SEH8 477 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 POLR2DO15514 142 aaKnown RBP18.74■□□□□ 0.59
SCN3B-202ENST00000392770 MYL5Q02045 173 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
SCN3B-202ENST00000392770 ZYXQ15942 572 aaKnown RBP18.74■□□□□ 0.59
SCN3B-202ENST00000392770 SPAG5Q96R06 1193 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 ADCK5Q3MIX3 580 aa18.74■□□□□ 0.59
SCN3B-202ENST00000392770 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 AGLP35573 1532 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 CCT6AP40227 531 aaKnown RBP18.73■□□□□ 0.59
SCN3B-202ENST00000392770 PKD2L1Q9P0L9 805 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 PUF60Q9UHX1 559 aaKnown RBP18.73■□□□□ 0.59
SCN3B-202ENST00000392770 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 CCDC172P0C7W6 258 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 C2CD5Q86YS7 1000 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 TAF3Q5VWG9 929 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
SCN3B-202ENST00000392770 CCDC66A2RUB6 948 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 H0YHG0 523 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 TRIM37O94972 964 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 TAX1BP1Q86VP1 789 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 TXKP42681 527 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 DOK7Q18PE1 504 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 FCHSD1Q86WN1 690 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 PICK1Q9NRD5 415 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 ZNF202O95125 648 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 SLC1A4P43007 532 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 TEKT1Q969V4 418 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 PRIMPOLQ96LW4 560 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 POTEB2H3BUK9 544 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 BTDP43251 543 aa18.72■□□□□ 0.59
SCN3B-202ENST00000392770 NONOQ15233 471 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCN3B-202ENST00000392770 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 CTNNBL1Q8WYA6 563 aaPredicted RBP18.71■□□□□ 0.59
SCN3B-202ENST00000392770 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 NEBLO76041 1014 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 SASH1O94885 1247 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 USP37Q86T82 979 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
SCN3B-202ENST00000392770 PKP1Q13835 747 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 DIP2AQ14689 1571 aa18.71■□□□□ 0.59
SCN3B-202ENST00000392770 XDHP47989 1333 aa18.71■□□□□ 0.58
SCN3B-202ENST00000392770 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 DNAI1Q9UI46 699 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 PPEF1O14829 653 aaPredicted RBP18.7■□□□□ 0.58
SCN3B-202ENST00000392770 CHMP2AO43633 222 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 PRPF4BQ13523 1007 aaKnown RBP18.7■□□□□ 0.58
SCN3B-202ENST00000392770 ZSWIM4Q9H7M6 989 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 ZNF445P59923 1031 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 PDE4DQ08499 809 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 SCRN1Q12765 414 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
SCN3B-202ENST00000392770 USH1GQ495M9 461 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 CCDC65Q8IXS2 484 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 TNKSO95271 1327 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 CCDC175P0C221 793 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 BAG6P46379 1132 aa18.7■□□□□ 0.58
SCN3B-202ENST00000392770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCN3B-202ENST00000392770 H7C1W4 665 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 SCNN1DP51172 638 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 CBX8Q9HC52 389 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 NLRP12P59046 1061 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 GLT8D2Q9H1C3 349 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 MTMR6Q9Y217 621 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 CPS1P31327 1500 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 B4DLN1 442 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 PDIA3P30101 505 aaKnown RBP18.69■□□□□ 0.58
SCN3B-202ENST00000392770 SP4Q02446 784 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 HS1BP3Q53T59 392 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 NAA15Q9BXJ9 866 aaKnown RBP18.69■□□□□ 0.58
SCN3B-202ENST00000392770 MACROD2A1Z1Q3 448 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 DLGAP5Q15398 846 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 NEK11Q8NG66 645 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 TMOD4Q9NZQ9 345 aa18.69■□□□□ 0.58
SCN3B-202ENST00000392770 GBP2P32456 591 aaPredicted RBP18.68■□□□□ 0.58
SCN3B-202ENST00000392770 CLCN1P35523 988 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 ADD2P35612 726 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 ARID5AQ03989 594 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 HLFQ16534 295 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 MROH2AA6NES4 1674 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
SCN3B-202ENST00000392770 SEMA3EO15041 775 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 RRP9O43818 475 aaKnown RBP18.68■□□□□ 0.58
SCN3B-202ENST00000392770 PI16Q6UXB8 463 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
SCN3B-202ENST00000392770 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 CD2BP2O95400 341 aaKnown RBP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 SERPINB2P05120 415 aa18.67■□□□□ 0.58
SCN3B-202ENST00000392770 ADD1P35611 737 aaKnown RBP18.67■□□□□ 0.58
SCN3B-202ENST00000392770 MYSM1Q5VVJ2 828 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms