RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 NUCKS1Q9H1E3 243 aaKnown RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 TSHZ2Q9NRE2 1034 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 PAG1Q9NWQ8 432 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 CPSF3Q9UKF6 684 aaKnown RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 PNMA3Q9UL41 463 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 PLB1Q6P1J6 1458 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 PSDA5PKW4 1024 aaPredicted RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 BIN1O00499 593 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 ZSCAN20P17040 1043 aaPredicted RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 USP14P54578 494 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 HADHQ16836 314 aaKnown RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 PPP1R2P3Q6NXS1 205 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 ZSCAN30Q86W11 494 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 ANKRD35Q8N283 1001 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 MED10Q9BTT4 135 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 TMEM106CQ9BVX2 250 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 ANO3Q9BYT9 981 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 NT5C3AQ9H0P0 336 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 ABT1Q9ULW3 272 aaKnown RBP4.43□□□□□ -1.7
UBR3-202ENST00000392632 PAXBP1Q9Y5B6 917 aa4.43□□□□□ -1.7
UBR3-202ENST00000392632 TTC41PQ6P2S7 1318 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ADGRL1O94910 1474 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PDE8AO60658 829 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 N4BP1O75113 896 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 ABL1P00519 1130 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 KRT19P08727 400 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 IRX4P78413 519 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CDR2Q01850 454 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 EIF2B5Q13144 721 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 RAPGEF1Q13905 1077 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 TAF11Q15544 211 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PPP2R5EQ16537 467 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 DCAF17Q5H9S7 520 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 CYP26C1Q6V0L0 522 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 INTS8Q75QN2 995 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 RSRC2Q7L4I2 434 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 PHLDB2Q86SQ0 1253 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ZNF713Q8N859 430 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 P3H4Q92791 437 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CDHR1Q96JP9 859 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PAGR1Q9BTK6 254 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ANAPC5Q9UJX4 755 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 NCAPD3P42695 1498 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PLEKHG3A1L390 1219 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 WDR64B1ANS9 1081 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 F6X3S4 739 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 I3L4J1 428 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 EXOC3O60645 756 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 GJB2P29033 226 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PDE4DQ08499 809 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 NEDD9Q14511 834 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PUM3Q15397 648 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 SLC4A8Q2Y0W8 1093 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CHST3Q7LGC8 479 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CACNA2D3Q8IZS8 1091 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PPP4R1Q8TF05 950 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 EDEM3Q9BZQ6 932 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ARFGAP3Q9NP61 516 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 BTG4Q9NY30 223 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 WWC3Q9ULE0 1092 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 RABGAP1Q9Y3P9 1069 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 PCDHB13Q9Y5F0 798 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SPTLC2O15270 562 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 TLR3O15455 904 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 ATP2B4P23634 1241 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 KRT9P35527 623 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 RECQLP46063 649 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 ADCY7P51828 1080 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 APOBRQ0VD83 1088 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 TUBB2AQ13885 445 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SKIV2LQ15477 1246 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 GANCQ8TET4 914 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SSH1Q8WYL5 1049 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 TUBB2BQ9BVA1 445 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ATP8A2Q9NTI2 1148 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 BABAM1Q9NWV8 329 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 EMILIN1Q9Y6C2 1016 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ARHGEF10O15013 1369 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ANKRD36BQ8N2N9 1353 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 DPYSL4O14531 572 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SRGAP2BP0DMP2 458 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 HOXA7P31268 230 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 MCM7P33993 719 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SLFN5Q08AF3 891 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CPLX4Q7Z7G2 160 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 CCDC84Q86UT8 332 aaPredicted RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 MAP7D3Q8IWC1 876 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SYCE1Q8N0S2 351 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 MAGEB6Q8N7X4 407 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 ZC3H15Q8WU90 426 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 CDCA7LQ96GN5 454 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SEC62Q99442 399 aaKnown RBP4.42□□□□□ -1.7
UBR3-202ENST00000392632 ITM2BQ9Y287 266 aa4.42□□□□□ -1.7
UBR3-202ENST00000392632 SYCE3A1L190 88 aa4.41□□□□□ -1.7
UBR3-202ENST00000392632 M0R2C6 588 aa4.41□□□□□ -1.7
UBR3-202ENST00000392632 DEXIO95424 95 aa4.41□□□□□ -1.7
UBR3-202ENST00000392632 RXRBP28702 533 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms