RNA–Protein interactions for RNA: ENST00000392571.6

PDK1-202, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDK1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-202ENST00000392571 NEDD4P46934 1319 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 SCN4AP35499 1836 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 TNNI2P48788 182 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 GABPAQ06546 454 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 TNFAIP1Q13829 316 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 RASA3Q14644 834 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 RUFY3Q7L099 469 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 ZSCAN29Q8IWY8 852 aaPredicted RBP29.32■■■□□ 2.28
PDK1-202ENST00000392571 NKX2-3Q8TAU0 364 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 LAMB1P07942 1786 aa29.32■■■□□ 2.28
PDK1-202ENST00000392571 HLA-DOAP06340 250 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 HMGB1P09429 215 aaKnown RBP29.31■■■□□ 2.28
PDK1-202ENST00000392571 CPA1P15085 419 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 TRDNQ13061 729 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 BLOC1S2Q6QNY1 142 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 C16orf86Q6ZW13 317 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 TMEM39BQ9GZU3 492 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 EHD4Q9H223 541 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 CNNM2Q9H8M5 875 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 SCAF8Q9UPN6 1271 aaKnown RBP29.31■■■□□ 2.28
PDK1-202ENST00000392571 CYP46A1Q9Y6A2 500 aa29.31■■■□□ 2.28
PDK1-202ENST00000392571 ORC4O43929 436 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 NEK4P51957 841 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 PDE4BQ07343 736 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 MB21D2Q8IYB1 491 aaPredicted RBP29.3■■■□□ 2.28
PDK1-202ENST00000392571 SERPINB13Q9UIV8 391 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 RPS6KB1P23443 525 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 DHX32Q7L7V1 743 aaKnown RBP29.3■■■□□ 2.28
PDK1-202ENST00000392571 METTL16Q86W50 562 aaKnown RBP29.3■■■□□ 2.28
PDK1-202ENST00000392571 APOBEC3FQ8IUX4 373 aaKnown RBP29.3■■■□□ 2.28
PDK1-202ENST00000392571 FOXP4Q8IVH2 680 aaPredicted RBP29.3■■■□□ 2.28
PDK1-202ENST00000392571 KRT23Q9C075 422 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 GGA3Q9NZ52 723 aa29.3■■■□□ 2.28
PDK1-202ENST00000392571 B4E1Z4 1266 aa29.29■■■□□ 2.28
PDK1-202ENST00000392571 CDK8P49336 464 aa29.29■■■□□ 2.28
PDK1-202ENST00000392571 EXOSC10Q01780 885 aaKnown RBP29.29■■■□□ 2.28
PDK1-202ENST00000392571 RALYLQ86SE5 291 aaKnown RBP29.29■■■□□ 2.28
PDK1-202ENST00000392571 DEFB129Q9H1M3 183 aa29.29■■■□□ 2.28
PDK1-202ENST00000392571 PITPNM2Q9BZ72 1349 aa29.28■■■□□ 2.28
PDK1-202ENST00000392571 PRDM1O75626 825 aa29.28■■■□□ 2.28
PDK1-202ENST00000392571 SLC44A5Q8NCS7 719 aa29.28■■■□□ 2.28
PDK1-202ENST00000392571 IL27Q8NEV9 243 aa29.28■■■□□ 2.28
PDK1-202ENST00000392571 ZC3H15Q8WU90 426 aaKnown RBP29.28■■■□□ 2.28
PDK1-202ENST00000392571 TAOK2Q9UL54 1235 aa29.28■■■□□ 2.28
PDK1-202ENST00000392571 RRP12Q5JTH9 1297 aaKnown RBP29.27■■■□□ 2.28
PDK1-202ENST00000392571 TEPSINQ96N21 525 aa29.27■■■□□ 2.28
PDK1-202ENST00000392571 TTC14Q96N46 770 aa29.27■■■□□ 2.28
PDK1-202ENST00000392571 CSRNP1Q96S65 589 aa29.27■■■□□ 2.28
PDK1-202ENST00000392571 ZSWIM5Q9P217 1185 aa29.27■■■□□ 2.28
PDK1-202ENST00000392571 PNMA8AQ86V59 439 aaPredicted RBP29.26■■■□□ 2.27
PDK1-202ENST00000392571 CDAN1Q8IWY9 1227 aa29.26■■■□□ 2.27
PDK1-202ENST00000392571 MKNK2Q9HBH9 465 aa29.26■■■□□ 2.27
PDK1-202ENST00000392571 ZNF287Q9HBT7 754 aa29.26■■■□□ 2.27
PDK1-202ENST00000392571 TOMM22Q9NS69 142 aa29.26■■■□□ 2.27
PDK1-202ENST00000392571 SWAP70Q9UH65 585 aa29.26■■■□□ 2.27
PDK1-202ENST00000392571 KDM4AO75164 1064 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 SLURP2P0DP57 97 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 MCM5P33992 734 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 CYB5R4Q7L1T6 521 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 RRAGCQ9HB90 399 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 PDRG1Q9NUG6 133 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 POLR2AP24928 1970 aaKnown RBP29.25■■■□□ 2.27
PDK1-202ENST00000392571 VEGFAP15692 232 aaPredicted RBP29.25■■■□□ 2.27
PDK1-202ENST00000392571 ANTXR2P58335 489 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 CHST3Q7LGC8 479 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 ESR2Q92731 530 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 DNAJC18Q9H819 358 aa29.25■■■□□ 2.27
PDK1-202ENST00000392571 SIPA1L1O43166 1804 aa29.24■■■□□ 2.27
PDK1-202ENST00000392571 RASA1P20936 1047 aa29.24■■■□□ 2.27
PDK1-202ENST00000392571 NT5C2P49902 561 aa29.24■■■□□ 2.27
PDK1-202ENST00000392571 DCPSQ96C86 337 aaKnown RBP29.24■■■□□ 2.27
PDK1-202ENST00000392571 TCEANC2Q96MN5 208 aa29.24■■■□□ 2.27
PDK1-202ENST00000392571 ALDH8A1Q9H2A2 487 aaPredicted RBP29.24■■■□□ 2.27
PDK1-202ENST00000392571 RANBP6O60518 1105 aaKnown RBP29.23■■■□□ 2.27
PDK1-202ENST00000392571 SHMT1P34896 483 aa29.23■■■□□ 2.27
PDK1-202ENST00000392571 MAP3K10Q02779 954 aa29.23■■■□□ 2.27
PDK1-202ENST00000392571 ZNF444Q8N0Y2 327 aaPredicted RBP29.23■■■□□ 2.27
PDK1-202ENST00000392571 CRACR2BQ8N4Y2 399 aaPredicted RBP29.23■■■□□ 2.27
PDK1-202ENST00000392571 PPP2R3BQ9Y5P8 575 aa29.23■■■□□ 2.27
PDK1-202ENST00000392571 WDR19Q8NEZ3 1342 aa29.23■■■□□ 2.27
PDK1-202ENST00000392571 PRC1O43663 620 aa29.22■■■□□ 2.27
PDK1-202ENST00000392571 ST18O60284 1047 aa29.22■■■□□ 2.27
PDK1-202ENST00000392571 TBC1D12O60347 775 aa29.22■■■□□ 2.27
PDK1-202ENST00000392571 CD2BP2O95400 341 aaKnown RBP29.22■■■□□ 2.27
PDK1-202ENST00000392571 EAPPQ56P03 285 aaPredicted RBP29.22■■■□□ 2.27
PDK1-202ENST00000392571 HERC5Q9UII4 1024 aaKnown RBP29.22■■■□□ 2.27
PDK1-202ENST00000392571 ANP32AP39687 249 aaKnown RBP29.21■■■□□ 2.27
PDK1-202ENST00000392571 FAM47AQ5JRC9 791 aa29.21■■■□□ 2.27
PDK1-202ENST00000392571 TATDN1Q6P1N9 297 aa29.21■■■□□ 2.27
PDK1-202ENST00000392571 SNX21Q969T3 373 aa29.21■■■□□ 2.27
PDK1-202ENST00000392571 FAM196BA6NMK8 535 aa29.2■■■□□ 2.27
PDK1-202ENST00000392571 FBXL16Q8N461 479 aa29.2■■■□□ 2.27
PDK1-202ENST00000392571 LRRC2Q9BYS8 371 aa29.2■■■□□ 2.27
PDK1-202ENST00000392571 TFAP4Q01664 338 aa29.2■■■□□ 2.26
PDK1-202ENST00000392571 NBPF12Q5TAG4 269 aaPredicted RBP29.2■■■□□ 2.26
PDK1-202ENST00000392571 Q6ZUG5 572 aa29.2■■■□□ 2.26
PDK1-202ENST00000392571 TRIM34Q9BYJ4 488 aa29.2■■■□□ 2.26
PDK1-202ENST00000392571 AK2P54819 239 aa29.19■■■□□ 2.26
PDK1-202ENST00000392571 SULF1Q8IWU6 871 aa29.19■■■□□ 2.26
PDK1-202ENST00000392571 IGDCC4Q8TDY8 1250 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms