RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
RTL8B-201ENST00000391440 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
RTL8B-201ENST00000391440 PICALMQ13492 652 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 FAM47AQ5JRC9 791 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 SGIP1Q9BQI5 828 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 SCN9AQ15858 1988 aa20.66■□□□□ 0.9
RTL8B-201ENST00000391440 FLT1P17948 1338 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 KIF13BQ9NQT8 1826 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 CPLX1O14810 134 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 CRKP46108 304 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 METAP2P50579 478 aaKnown RBP eCLIP20.65■□□□□ 0.9
RTL8B-201ENST00000391440 USP40Q9NVE5 1235 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 ZBTB43O43298 467 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 ORC4O43929 436 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 DHX16O60231 1041 aaKnown RBP20.65■□□□□ 0.9
RTL8B-201ENST00000391440 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
RTL8B-201ENST00000391440 FOSBP53539 338 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 HHIPL2Q6UWX4 724 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 CHMP4CQ96CF2 233 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
RTL8B-201ENST00000391440 PCDHAC2Q9Y5I4 1007 aa20.65■□□□□ 0.9
RTL8B-201ENST00000391440 TNKSO95271 1327 aa20.64■□□□□ 0.89
RTL8B-201ENST00000391440 F13A1P00488 732 aa20.64■□□□□ 0.89
RTL8B-201ENST00000391440 ADD1P35611 737 aaKnown RBP20.64■□□□□ 0.89
RTL8B-201ENST00000391440 FKBP1AP62942 108 aaKnown RBP20.64■□□□□ 0.89
RTL8B-201ENST00000391440 APOBEC3HQ6NTF7 200 aaKnown RBP20.64■□□□□ 0.89
RTL8B-201ENST00000391440 SYNE3Q6ZMZ3 975 aa20.64■□□□□ 0.89
RTL8B-201ENST00000391440 CDC37L1Q7L3B6 337 aa20.64■□□□□ 0.89
RTL8B-201ENST00000391440 RAD17O75943 681 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 PTGER2P43116 358 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 HMGN5P82970 282 aaKnown RBP20.63■□□□□ 0.89
RTL8B-201ENST00000391440 SOGA3Q5TF21 947 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 MKNK2Q9HBH9 465 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 NMT2O60551 498 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 CDC27P30260 824 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 CDC42EP5Q6NZY7 148 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 TMTC2Q8N394 836 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 ENAHQ8N8S7 591 aaPredicted RBP20.63■□□□□ 0.89
RTL8B-201ENST00000391440 SLC44A5Q8NCS7 719 aa20.63■□□□□ 0.89
RTL8B-201ENST00000391440 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 GOLGA8AA7E2F4 631 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 SEC23AQ15436 765 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 FERMT3Q86UX7 667 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 MTA3Q9BTC8 594 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 CD2APQ9Y5K6 639 aa20.62■□□□□ 0.89
RTL8B-201ENST00000391440 H3BQV1 296 aa20.61■□□□□ 0.89
RTL8B-201ENST00000391440 TRAK2O60296 914 aa20.61■□□□□ 0.89
RTL8B-201ENST00000391440 WDHD1O75717 1129 aaPredicted RBP20.61■□□□□ 0.89
RTL8B-201ENST00000391440 IFFO2Q5TF58 517 aa20.61■□□□□ 0.89
RTL8B-201ENST00000391440 DDX4Q9NQI0 724 aaKnown RBP20.61■□□□□ 0.89
RTL8B-201ENST00000391440 FDPSP14324 419 aaKnown RBP20.61■□□□□ 0.89
RTL8B-201ENST00000391440 NUP133Q8WUM0 1156 aa20.61■□□□□ 0.89
RTL8B-201ENST00000391440 ZDHHC15Q96MV8 337 aa20.61■□□□□ 0.89
RTL8B-201ENST00000391440 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
RTL8B-201ENST00000391440 TFAP4Q01664 338 aa20.6■□□□□ 0.89
RTL8B-201ENST00000391440 IFIT1BQ5T764 474 aaKnown RBP20.6■□□□□ 0.89
RTL8B-201ENST00000391440 LAMB1P07942 1786 aa20.6■□□□□ 0.89
RTL8B-201ENST00000391440 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
RTL8B-201ENST00000391440 ZNF654Q8IZM8 581 aa20.6■□□□□ 0.89
RTL8B-201ENST00000391440 MRIQ9BWK5 157 aa20.6■□□□□ 0.89
RTL8B-201ENST00000391440 FAM217BQ9NTX9 383 aaPredicted RBP20.6■□□□□ 0.89
RTL8B-201ENST00000391440 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
RTL8B-201ENST00000391440 KIF3AQ9Y496 699 aa20.6■□□□□ 0.89
RTL8B-201ENST00000391440 NAV1Q8NEY1 1877 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 CDK5RAP2Q96SN8 1893 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 PSMD14O00487 310 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
RTL8B-201ENST00000391440 CACNB3P54284 484 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 NIM1KQ8IY84 436 aa20.59■□□□□ 0.89
RTL8B-201ENST00000391440 ZNF444Q8N0Y2 327 aaPredicted RBP20.59■□□□□ 0.89
RTL8B-201ENST00000391440 CDK8P49336 464 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 HDLBPQ00341 1268 aaKnown RBP20.58■□□□□ 0.89
RTL8B-201ENST00000391440 GUCY1B3Q02153 619 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 NFIAQ12857 509 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 PHKBQ93100 1093 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 TAOK3Q9H2K8 898 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 GDPD2Q9HCC8 539 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 TAOK2Q9UL54 1235 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 ROBO3Q96MS0 1386 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 COL4A5P29400 1685 aa20.58■□□□□ 0.89
RTL8B-201ENST00000391440 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.88
RTL8B-201ENST00000391440 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.88
RTL8B-201ENST00000391440 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.88
RTL8B-201ENST00000391440 SERPINA10Q9UK55 444 aa20.58■□□□□ 0.88
RTL8B-201ENST00000391440 ZNRF3Q9ULT6 936 aa20.58■□□□□ 0.88
RTL8B-201ENST00000391440 ZBTB12Q9Y330 459 aaPredicted RBP20.58■□□□□ 0.88
RTL8B-201ENST00000391440 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
RTL8B-201ENST00000391440 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
RTL8B-201ENST00000391440 NCLP19338 710 aaKnown RBP20.57■□□□□ 0.88
RTL8B-201ENST00000391440 RTN1Q16799 776 aa20.57■□□□□ 0.88
RTL8B-201ENST00000391440 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
RTL8B-201ENST00000391440 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
RTL8B-201ENST00000391440 CDKL5O76039 1030 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms