RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 ECM29Q5VYK3 1845 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 HLA-DOAP06340 250 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 ZAP70P43403 619 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 PSMC4P43686 418 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 NKX2-3Q8TAU0 364 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 GCC1Q96CN9 775 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 EHD4Q9H223 541 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 PTCH2Q9Y6C5 1203 aa8.59□□□□□ -1.03
RNU1-56P-201ENST00000391303 C19orf81C9J6K1 198 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 IRF5Q13568 498 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 FAM110CQ1W6H9 321 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 AACSQ86V21 672 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 PXYLP1Q8TE99 480 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 SH3RF3Q8TEJ3 882 aaPredicted RBP8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 SMCR8Q8TEV9 937 aaPredicted RBP8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 TRIM34Q9BYJ4 488 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 C1orf115Q9H7X2 142 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 AATFQ9NY61 560 aaKnown RBP eCLIP8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 CPA4Q9UI42 421 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 LAMB1P07942 1786 aa8.58□□□□□ -1.04
RNU1-56P-201ENST00000391303 FLT1P17948 1338 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 AKAP11Q9UKA4 1901 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 TRIM75PA6NK02 468 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 IDH1O75874 414 aaKnown RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 OSBPP22059 807 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 CYP7A1P22680 504 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 GRK4P32298 578 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 UBXN2AP68543 259 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 SPP2Q13103 211 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 GADL1Q6ZQY3 521 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 RAET1EQ8TD07 263 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 TGFBRAP1Q8WUH2 860 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 PIH1D3Q9NQM4 214 aaKnown RBP8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 CASP8AP2Q9UKL3 1982 aa8.57□□□□□ -1.04
RNU1-56P-201ENST00000391303 MYPNQ86TC9 1320 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 POTEFA5A3E0 1075 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 SLC34A2O95436 690 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 CYP2C8P10632 490 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 BACE1P56817 501 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 CAP1Q01518 475 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 SLC4A8Q2Y0W8 1093 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 TATDN1Q6P1N9 297 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 ADGRA1Q86SQ6 560 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 COA7Q96BR5 231 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 TLR7Q9NYK1 1049 aaKnown RBP8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 TMOD4Q9NZQ9 345 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 SERPINB13Q9UIV8 391 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 EXOC6BQ9Y2D4 811 aa8.56□□□□□ -1.04
RNU1-56P-201ENST00000391303 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 TNPO2O14787 897 aaKnown RBP8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 GJB1P08034 283 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 ATP5JP18859 108 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 USP5P45974 858 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 USP14P54578 494 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 MAPKAPK5Q8IW41 473 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 MAGEB6Q8N7X4 407 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 C12orf42Q96LP6 360 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 CRNKL1Q9BZJ0 848 aaKnown RBP8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 ARHGAP39Q9C0H5 1083 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 MORF4L1Q9UBU8 362 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 ZBTB21Q9ULJ3 1066 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
RNU1-56P-201ENST00000391303 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 CTGFP29279 349 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 GJA8P48165 433 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 HMGCS2P54868 508 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 IRX3P78415 501 aaPredicted RBP8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 PRKCZQ05513 592 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 SLC9C2Q5TAH2 1124 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 USP17L2Q6R6M4 530 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 SIRT2Q8IXJ6 389 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 KIAA1683Q9H0B3 1180 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 DNAJC18Q9H819 358 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 CABP5Q9NP86 173 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 PALD1Q9ULE6 856 aa8.54□□□□□ -1.04
RNU1-56P-201ENST00000391303 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
RNU1-56P-201ENST00000391303 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
RNU1-56P-201ENST00000391303 PDE6AP16499 860 aa8.53□□□□□ -1.04
RNU1-56P-201ENST00000391303 EN2P19622 333 aaPredicted RBP8.53□□□□□ -1.04
RNU1-56P-201ENST00000391303 FLT3LGP49771 235 aa8.53□□□□□ -1.04
RNU1-56P-201ENST00000391303 MTMR2Q13614 643 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms